Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNORD114-2-201ENST00000363953 78 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 Y_RNA.549-201ENST00000384657 102 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AC241584.1-201ENST00000438469 1241 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 HMGB1P22-201ENST00000505315 124 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AC133963.2-201ENST00000513686 578 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AL160236.1-201ENST00000556317 195 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 ZNF965P-201ENST00000432501 817 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 BX248409.1-201ENST00000455497 255 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 RPL26P9-201ENST00000457466 433 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AC117503.1-201ENST00000472241 394 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 RNU5F-8P-201ENST00000515941 111 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AL355802.3-201ENST00000607571 545 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 AC090132.2-201ENST00000615881 347 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 BTF3L4P2-201ENST00000392798 346 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AL139397.2-201ENST00000404529 772 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 HSPE1P21-201ENST00000438283 308 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AC004854.1-201ENST00000440356 349 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AL035666.1-201ENST00000446195 348 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 RPL23AP35-201ENST00000451906 501 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 MIR4299-201ENST00000577899 72 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AC099548.1-201ENST00000421443 426 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AC023141.11-201ENST00000508864 202 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 OR1M4P-201ENST00000589199 287 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AC091925.1-201ENST00000623204 462 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 Y_RNA.390-201ENST00000383932 102 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 FCF1P2-201ENST00000415284 583 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 RPL27AP8-201ENST00000424277 446 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 RPS15AP27-201ENST00000449183 343 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AP003497.1-201ENST00000528472 562 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 GAS5-AS1-201ENST00000602767 694 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 DUSP12P1-201ENST00000612874 516 ntBASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
ALMS1Q8TCU4 RNU6-317P-201ENST00000384031 107 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC092393.1-201ENST00000439625 742 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AL450336.1-201ENST00000605180 586 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC012443.1-201ENST00000605605 231 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 MIR6857-201ENST00000613267 93 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 SNORD114-23-201ENST00000363536 72 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 HMGB1P9-201ENST00000429856 646 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 SNORA31.20-201ENST00000517111 133 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AP000776.1-201ENST00000530032 1663 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 SNORA2A-201ENST00000383885 135 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC104806.1-201ENST00000508720 308 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 CYCSP23-201ENST00000519781 313 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AP006587.4-201ENST00000526053 529 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC138473.1-201ENST00000605717 526 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AC099842.1-201ENST00000619919 596 ntBASIC0.55□□□□□ -2.32
ALMS1Q8TCU4 AL589994.1-201ENST00000404962 340 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AC000111.3-201ENST00000433478 193 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 snoU13.4-201ENST00000458916 104 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AC004808.1-201ENST00000627671 721 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 USP12PX-201ENST00000432383 1057 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 PCNAP1-201ENST00000505363 709 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AC004062.1-201ENST00000509926 645 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 MIR4713-201ENST00000582691 75 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 MTND4LP3-201ENST00000468320 276 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 RN7SKP277-201ENST00000516895 283 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 AP003400.5-201ENST00000624827 617 ntBASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
ALMS1Q8TCU4 RNY4P3-201ENST00000365254 95 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 RPL39P29-201ENST00000447779 157 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AC010186.2-204ENST00000537668 439 ntBASIC0.53□□□□□ -2.32
ALMS1Q8TCU4 AL391261.3-201ENST00000557194 520 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms