Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 MTCO3P13-201ENST00000577757 781 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 MIR3682-201ENST00000581338 84 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AC079089.3-201ENST00000603094 673 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AC087752.4-201ENST00000605911 462 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AL133173.2-201ENST00000614270 90 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 AL589994.2-201ENST00000621124 579 ntBASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC60Q8IWA6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC091564.4-201ENST00000533934 2194 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 Y_RNA.51-201ENST00000362725 102 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 RNU6-511P-201ENST00000363496 107 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 RNU4-1-201ENST00000363925 141 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 Z85995.1-201ENST00000415547 335 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC010153.1-201ENST00000432862 727 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 GAPDHP17-201ENST00000449858 1001 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 GSTA11P-201ENST00000452866 669 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AL135752.1-201ENST00000479477 471 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 MTND4P2-201ENST00000507767 1203 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 RAC1P5-201ENST00000512182 576 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC022447.1-201ENST00000515358 464 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 RNA5SP291-201ENST00000517222 105 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC078899.3-201ENST00000599065 212 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC080013.6-201ENST00000606185 215 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC093783.1-201ENST00000612976 329 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
CCDC60Q8IWA6 AC092447.7-201ENST00000422212 1621 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 SNORA26.7-201ENST00000391288 122 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 USP9YP20-201ENST00000419224 558 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 RAC1P6-201ENST00000423911 575 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC137499.1-201ENST00000427602 88 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 ARPC3P1-201ENST00000437218 533 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC244505.5-201ENST00000443639 207 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AL513328.1-201ENST00000446460 224 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC010099.1-201ENST00000455434 375 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 MTND4LP3-201ENST00000468320 276 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 RPS20P22-201ENST00000473700 357 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 ARL2BPP4-201ENST00000506854 471 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 RNU2-10P-201ENST00000516375 211 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 RNU6-928P-201ENST00000516876 104 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 RNU6-56P-201ENST00000516986 93 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 RN7SKP258-201ENST00000517151 304 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 TRAV28-201ENST00000557548 323 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 MIR3609-201ENST00000582661 80 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC098614.4-201ENST00000607601 462 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC006566.1-201ENST00000608943 513 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC009090.3-201ENST00000616553 565 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AC048344.4-201ENST00000619744 527 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 PISRT1-201ENST00000626175 531 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 AL049641.1-201ENST00000441055 1948 ntBASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC60Q8IWA6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 SNORD56.2-201ENST00000363242 71 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RNU4-40P-201ENST00000364351 143 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RNA5SP126-201ENST00000365092 109 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 Y_RNA.359-201ENST00000365498 102 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 SNORA20.2-201ENST00000383922 131 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 SNORA67.4-201ENST00000384688 142 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RNU2-33P-201ENST00000410344 192 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 RNU6-248P-201ENST00000410720 107 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 C1DP2-201ENST00000418167 426 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AC073614.1-201ENST00000438690 650 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 Z82210.1-201ENST00000440037 231 ntBASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC60Q8IWA6 SNORD97-201ENST00000459187 142 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms