Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC011494.1-201ENST00000596454 237 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC020914.4-201ENST00000597690 277 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AL109918.3-201ENST00000603072 338 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC174048.1-201ENST00000603389 144 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 RNU6-715P-201ENST00000365204 103 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VRK3Q8IV63 Y_RNA.473-201ENST00000384333 102 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AL603908.1-201ENST00000406098 201 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VRK3Q8IV63 UBE2FP1-201ENST00000416536 447 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 AL591704.1-201ENST00000432574 275 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 MTCO3P45-201ENST00000443036 613 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 NOTCH2P1-201ENST00000443481 624 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 AC104472.2-201ENST00000469035 601 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AC087884.1-201ENST00000469738 328 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 TBCAP3-201ENST00000512475 312 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AC026801.2-201ENST00000515352 425 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 SNORD116.3-201ENST00000517176 78 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 IGKV2D-36-201ENST00000518643 226 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VRK3Q8IV63 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 AL355812.1-201ENST00000603215 216 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AL670379.4-201ENST00000605279 254 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AC062037.2-201ENST00000610137 73 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AC006329.2-201ENST00000611491 394 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 AC007998.5-201ENST00000622938 237 ntBASIC3.74□□□□□ -1.81
VRK3Q8IV63 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VRK3Q8IV63 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VRK3Q8IV63 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VRK3Q8IV63 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VRK3Q8IV63 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 SNORD62.1-201ENST00000362541 86 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 RNU6-238P-201ENST00000363313 106 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 Y_RNA.257-201ENST00000364596 102 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 Y_RNA.380-201ENST00000365663 111 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 Y_RNA.428-201ENST00000384078 102 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 Y_RNA.493-201ENST00000384422 102 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 RNU6-823P-201ENST00000391042 103 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AL138878.1-201ENST00000405131 347 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 RNU4-65P-201ENST00000410473 140 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 DPH3P2-201ENST00000422618 250 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 USMG5P1-201ENST00000425964 177 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AL645568.3-201ENST00000433683 316 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AL356535.1-201ENST00000440335 398 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 AL500522.2-201ENST00000448562 343 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AL162389.1-201ENST00000449233 177 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC010631.1-201ENST00000474150 156 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC087385.1-201ENST00000475062 312 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 TRBV12-2-201ENST00000489763 344 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 RPL22P13-201ENST00000493291 347 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 RPL7P23-201ENST00000493874 747 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC026402.1-201ENST00000513642 170 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 RNA5SP384-201ENST00000516615 116 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 RNU6-1332P-201ENST00000516666 104 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 CR383656.7-201ENST00000548164 174 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC087499.8-201ENST00000578406 226 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 SNORA62.6-201ENST00000606322 83 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC100812.1-201ENST00000607622 580 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 HMGB1P24-202ENST00000615653 685 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 AC110801.1-201ENST00000623590 212 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VRK3Q8IV63 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VRK3Q8IV63 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VRK3Q8IV63 SAGE2P-201ENST00000420011 2126 ntBASIC3.73□□□□□ -1.81
VRK3Q8IV63 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VRK3Q8IV63 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms