Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 LINC00933-203ENST00000559812 219 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 MIR6768-201ENST00000610734 72 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 MIR6862-1-201ENST00000613016 70 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 MIR6862-2-201ENST00000614755 70 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 MIR8069-1-201ENST00000616627 86 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 AC024581.2-201ENST00000619986 252 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 MIR8069-2-201ENST00000621412 86 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 SNORA43.4-201ENST00000629559 138 ntBASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CDPF1Q6NVV7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC118273.1-201ENST00000525324 3006 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 OR4F13P-202ENST00000560066 2054 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 ZNF204P-201ENST00000416749 2397 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RNU6-942P-201ENST00000363002 107 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 Y_RNA.215-201ENST00000364204 112 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RNA5SP211-201ENST00000365516 117 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 Z98749.2-208ENST00000381646 500 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RNU6-211P-201ENST00000384047 107 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RNA5SP284-201ENST00000384547 118 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RN7SKP125-201ENST00000410481 302 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AL358075.3-201ENST00000426289 226 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RPS12P17-201ENST00000438591 377 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 Z82210.1-201ENST00000440037 231 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 snoU13.24-201ENST00000458998 104 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC100832.1-201ENST00000471945 383 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC005840.1-201ENST00000498412 377 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 HMGB1P22-201ENST00000505315 124 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RN7SKP46-201ENST00000515942 234 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 RN7SKP35-201ENST00000517210 151 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AC053481.4-201ENST00000583164 216 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AL365222.1-201ENST00000614661 98 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 AL445487.1-201ENST00000415694 1580 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 SAMMSON-226ENST00000642089 1582 ntBASIC4.09□□□□□ -1.75
CDPF1Q6NVV7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.09□□□□□ -1.76
CDPF1Q6NVV7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 SNORA21-201ENST00000362423 132 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 RN7SKP104-201ENST00000362605 328 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 MIR518D-201ENST00000385014 87 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 DDX39BP1-205ENST00000422507 192 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AC005077.1-201ENST00000449226 375 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 HMGB3P3-201ENST00000510526 400 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AC093840.1-201ENST00000511599 336 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 SNORA70.16-201ENST00000516390 95 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 RNU6-1183P-201ENST00000517054 60 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 IGKV3D-25-201ENST00000519599 235 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 MIR5571-201ENST00000577998 113 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 snoU18.1-201ENST00000629629 71 ntBASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDPF1Q6NVV7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms