Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC087190.1-201ENST00000484462 480 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC107032.1-201ENST00000485945 480 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 RNA5SP446-201ENST00000515955 82 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 RNU7-200P-201ENST00000516105 62 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 RNU6-677P-201ENST00000516914 101 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC025884.1-201ENST00000556034 378 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 CPDP1-201ENST00000579660 283 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC067852.3-201ENST00000589177 561 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 AP001485.1-201ENST00000604799 199 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 ZNF285B-201ENST00000561698 1767 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC090740.1-201ENST00000623193 2262 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF43Q68DV7 RAD17P1-201ENST00000418130 2042 ntBASIC4.72□□□□□ -1.65
RNF43Q68DV7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF43Q68DV7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.71□□□□□ -1.65
RNF43Q68DV7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.71□□□□□ -1.65
RNF43Q68DV7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.71□□□□□ -1.65
RNF43Q68DV7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 HAUS6P2-201ENST00000433254 2404 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 Y_RNA.76-201ENST00000362931 109 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RNU6-1290P-201ENST00000362957 109 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RNU6-1317P-201ENST00000364582 104 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 SNORD50.2-201ENST00000365465 70 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RPS29P13-201ENST00000402041 169 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RNU2-21P-201ENST00000410368 188 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AL159987.2-201ENST00000432754 307 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 CYCSP43-201ENST00000438233 310 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RPL37P6-201ENST00000460682 294 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC109925.1-201ENST00000478069 331 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC091167.1-201ENST00000492017 396 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC010469.2-201ENST00000496412 480 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 PPBPP1-201ENST00000510807 373 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC074250.1-201ENST00000511117 192 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC016065.2-201ENST00000514530 444 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 RNU6-390P-201ENST00000516259 103 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 IGLV3-26-201ENST00000520756 302 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC022559.1-201ENST00000520905 205 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC005951.2-201ENST00000576282 495 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 MIR3138-201ENST00000585238 82 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AL121917.1-203ENST00000605534 577 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC005344.1-201ENST00000613391 459 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 MIR6864-201ENST00000617935 70 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AP005019.3-201ENST00000620418 560 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 AL031601.2-202ENST00000622650 282 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AC025031.4-201ENST00000621248 3271 ntBASIC4.71□□□□□ -1.66
RNF43Q68DV7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
RNF43Q68DV7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF43Q68DV7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 DDX10P1-201ENST00000448545 1933 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 AC011978.2-201ENST00000569835 2054 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 Y_RNA.27-201ENST00000362540 103 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 SNORA71.2-201ENST00000364941 134 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 Y_RNA.439-201ENST00000384119 94 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 RNU6-933P-201ENST00000384424 107 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 RNU6-700P-201ENST00000391043 107 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AL591034.2-201ENST00000402839 359 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AL513475.1-201ENST00000406602 315 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms