Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC005498.1-201ENST00000592125 465 ntBASIC3.53□□□□□ -1.84
SUMO3P55854 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.53□□□□□ -1.84
SUMO3P55854 AL121757.2-201ENST00000611223 313 ntBASIC3.53□□□□□ -1.84
SUMO3P55854 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SUMO3P55854 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.53□□□□□ -1.84
SUMO3P55854 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.53□□□□□ -1.84
SUMO3P55854 AC073308.1-201ENST00000623696 305 ntBASIC3.53□□□□□ -1.84
SUMO3P55854 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SUMO3P55854 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SUMO3P55854 MTND5P7-201ENST00000413558 1798 ntBASIC3.53□□□□□ -1.84
SUMO3P55854 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SUMO3P55854 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
SUMO3P55854 SRP72P2-201ENST00000344851 1979 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SUMO3P55854 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
SUMO3P55854 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SUMO3P55854 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.52□□□□□ -1.85
SUMO3P55854 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SUMO3P55854 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SUMO3P55854 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SUMO3P55854 SNORD14B-201ENST00000364533 90 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 Y_RNA.263-201ENST00000364659 114 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 RNU6-384P-201ENST00000364900 104 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SUMO3P55854 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SUMO3P55854 MIR450B-201ENST00000401182 78 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 RN7SKP263-201ENST00000411194 309 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 NDUFS5P4-201ENST00000412983 318 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 NDUFB4P5-201ENST00000415445 361 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.52□□□□□ -1.85
SUMO3P55854 RPL21P109-201ENST00000422213 475 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.52□□□□□ -1.85
SUMO3P55854 AL353729.1-201ENST00000425044 720 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 SKA2P1-201ENST00000425592 390 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AL158071.1-201ENST00000430315 461 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AC093019.1-201ENST00000443135 252 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.52□□□□□ -1.85
SUMO3P55854 RPL37P4-201ENST00000448908 268 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 snoU13.28-201ENST00000459235 104 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AC087884.1-201ENST00000469738 328 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AC068587.1-201ENST00000483613 781 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.52□□□□□ -1.85
SUMO3P55854 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.52□□□□□ -1.85
SUMO3P55854 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.52□□□□□ -1.85
SUMO3P55854 AC087854.1-201ENST00000519706 414 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 NACAP3-201ENST00000552100 481 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 H3F3AP1-201ENST00000559984 334 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 MIR4782-201ENST00000577987 79 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 AC110741.2-201ENST00000605278 268 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 Y_RNA.804-201ENST00000615262 101 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.52□□□□□ -1.85
SUMO3P55854 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.52□□□□□ -1.85
SUMO3P55854 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SUMO3P55854 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SUMO3P55854 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SUMO3P55854 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
SUMO3P55854 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SUMO3P55854 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.51□□□□□ -1.85
SUMO3P55854 NCAPGP1-201ENST00000505112 1814 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SUMO3P55854 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SUMO3P55854 Y_RNA.301-201ENST00000364990 103 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 RNA5SP283-201ENST00000365604 119 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.51□□□□□ -1.85
SUMO3P55854 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SUMO3P55854 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SUMO3P55854 AL356057.2-201ENST00000403318 432 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 RNU6-1077P-201ENST00000410506 102 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AL353678.1-201ENST00000422735 741 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.51□□□□□ -1.85
SUMO3P55854 HMGB1P9-201ENST00000429856 646 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 HMGB3P22-202ENST00000451823 572 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.51□□□□□ -1.85
SUMO3P55854 PPP1R2P5-201ENST00000457256 603 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC117503.1-201ENST00000472241 394 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC103987.1-201ENST00000473394 348 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.51□□□□□ -1.85
SUMO3P55854 SNORA31.1-201ENST00000515993 133 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 SNORA31.5-201ENST00000516190 133 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 RN7SKP21-201ENST00000516503 220 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 RNU6-256P-201ENST00000516747 97 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.51□□□□□ -1.85
SUMO3P55854 AP000889.2-201ENST00000532684 490 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.51□□□□□ -1.85
SUMO3P55854 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC026464.5-201ENST00000562497 722 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC037471.2-201ENST00000564941 598 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 MIR3160-1-201ENST00000577972 85 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 MIR4474-201ENST00000579189 78 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.51□□□□□ -1.85
SUMO3P55854 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
SUMO3P55854 FGF7P1-201ENST00000582820 288 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 uc_338.5-201ENST00000611839 155 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC005344.1-201ENST00000613391 459 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 AC005858.4-201ENST00000623191 700 ntBASIC3.51□□□□□ -1.85
SUMO3P55854 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.51□□□□□ -1.85
SUMO3P55854 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SUMO3P55854 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SUMO3P55854 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms