Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 UBE2D3P3-201ENST00000426992 425 ntBASIC1.53□□□□□ -2.16
CDC34P49427 GPM6BP2-201ENST00000432046 144 ntBASIC1.53□□□□□ -2.16
CDC34P49427 RPL36AP53-201ENST00000432891 316 ntBASIC1.53□□□□□ -2.16
CDC34P49427 GTF2IP3-201ENST00000433887 494 ntBASIC1.53□□□□□ -2.16
CDC34P49427 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CDC34P49427 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
CDC34P49427 GPM6BP1-201ENST00000446387 144 ntBASIC1.53□□□□□ -2.16
CDC34P49427 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.53□□□□□ -2.16
CDC34P49427 RPL18AP17-201ENST00000455326 198 ntBASIC1.53□□□□□ -2.16
CDC34P49427 AC104685.1-201ENST00000502445 371 ntBASIC1.53□□□□□ -2.16
CDC34P49427 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC34P49427 RNU6-1225P-201ENST00000516336 65 ntBASIC1.53□□□□□ -2.16
CDC34P49427 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
CDC34P49427 AC104417.1-201ENST00000523974 751 ntBASIC1.53□□□□□ -2.16
CDC34P49427 AP000776.1-201ENST00000530032 1663 ntBASIC1.53□□□□□ -2.16
CDC34P49427 AP005901.5-201ENST00000545779 1796 ntBASIC1.53□□□□□ -2.16
CDC34P49427 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC34P49427 SNRPGP18-201ENST00000553000 214 ntBASIC1.53□□□□□ -2.16
CDC34P49427 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC34P49427 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.53□□□□□ -2.16
CDC34P49427 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.53□□□□□ -2.16
CDC34P49427 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.53□□□□□ -2.16
CDC34P49427 BX323046.1-201ENST00000610145 535 ntBASIC1.53□□□□□ -2.16
CDC34P49427 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.53□□□□□ -2.16
CDC34P49427 MIR6873-201ENST00000622788 63 ntBASIC1.53□□□□□ -2.16
CDC34P49427 AC025034.2-201ENST00000623264 286 ntBASIC1.53□□□□□ -2.16
CDC34P49427 OR1S1-201ENST00000624470 978 ntBASIC1.53□□□□□ -2.16
CDC34P49427 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC34P49427 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDC34P49427 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDC34P49427 CDC27P3-201ENST00000635418 1910 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC34P49427 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC34P49427 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC34P49427 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDC34P49427 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CDC34P49427 AC019129.1-201ENST00000403786 261 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AC009963.1-201ENST00000417265 157 ntBASIC1.52□□□□□ -2.17
CDC34P49427 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC34P49427 C1DP1-201ENST00000426049 402 ntBASIC1.52□□□□□ -2.17
CDC34P49427 ISCA1P1-201ENST00000426679 387 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 MTND4P15-201ENST00000437913 1033 ntBASIC1.52□□□□□ -2.17
CDC34P49427 HIGD1AP2-201ENST00000446367 280 ntBASIC1.52□□□□□ -2.17
CDC34P49427 MTND1P31-201ENST00000449206 961 ntBASIC1.52□□□□□ -2.17
CDC34P49427 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 AC108938.1-201ENST00000451204 136 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC34P49427 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC34P49427 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
CDC34P49427 RPS3AP14-201ENST00000483907 780 ntBASIC1.52□□□□□ -2.17
CDC34P49427 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 SLC25A15P5-201ENST00000508033 253 ntBASIC1.52□□□□□ -2.17
CDC34P49427 RNU6-581P-201ENST00000516214 105 ntBASIC1.52□□□□□ -2.17
CDC34P49427 RNU6-362P-201ENST00000516736 90 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 AC024614.2-201ENST00000577584 372 ntBASIC1.52□□□□□ -2.17
CDC34P49427 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
CDC34P49427 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.52□□□□□ -2.17
CDC34P49427 AC098826.3-201ENST00000603823 466 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AC087045.1-201ENST00000605856 382 ntBASIC1.52□□□□□ -2.17
CDC34P49427 RNU6-91P-201ENST00000607774 107 ntBASIC1.52□□□□□ -2.17
CDC34P49427 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDC34P49427 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.52□□□□□ -2.17
CDC34P49427 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
CDC34P49427 AL356292.1-201ENST00000283110 373 ntBASIC1.51□□□□□ -2.17
CDC34P49427 MIR126-201ENST00000362291 85 ntBASIC1.51□□□□□ -2.17
CDC34P49427 U8.3-201ENST00000363321 132 ntBASIC1.51□□□□□ -2.17
CDC34P49427 Y_RNA.408-201ENST00000383987 102 ntBASIC1.51□□□□□ -2.17
CDC34P49427 MIR128-1-201ENST00000384921 82 ntBASIC1.51□□□□□ -2.17
CDC34P49427 AL603865.2-201ENST00000401679 213 ntBASIC1.51□□□□□ -2.17
CDC34P49427 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC34P49427 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC34P49427 USP9YP24-201ENST00000434374 697 ntBASIC1.51□□□□□ -2.17
CDC34P49427 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.51□□□□□ -2.17
CDC34P49427 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC34P49427 MTND5P14-201ENST00000441481 1267 ntBASIC1.51□□□□□ -2.17
CDC34P49427 AC092001.1-201ENST00000453012 261 ntBASIC1.51□□□□□ -2.17
CDC34P49427 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC34P49427 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC34P49427 AC008481.1-201ENST00000463278 396 ntBASIC1.51□□□□□ -2.17
CDC34P49427 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC34P49427 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC34P49427 AC117522.2-201ENST00000510049 657 ntBASIC1.51□□□□□ -2.17
CDC34P49427 IGKV3-31-201ENST00000523109 329 ntBASIC1.51□□□□□ -2.17
CDC34P49427 AP001646.1-201ENST00000527936 915 ntBASIC1.51□□□□□ -2.17
CDC34P49427 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CDC34P49427 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.51□□□□□ -2.17
CDC34P49427 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC34P49427 MIR5089-201ENST00000580047 84 ntBASIC1.51□□□□□ -2.17
CDC34P49427 AC021646.1-201ENST00000605469 484 ntBASIC1.51□□□□□ -2.17
CDC34P49427 Y_RNA.783-201ENST00000613546 102 ntBASIC1.51□□□□□ -2.17
CDC34P49427 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC34P49427 AC092192.1-201ENST00000633154 1018 ntBASIC1.51□□□□□ -2.17
CDC34P49427 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC34P49427 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDC34P49427 AL079343.1-201ENST00000572358 1771 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms