Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXA9P31269 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA9P31269 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA9P31269 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC107214.2-201ENST00000608204 634 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC012150.2-201ENST00000621300 544 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC131159.1-201ENST00000621854 213 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC008443.7-201ENST00000622195 246 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AP000676.3-201ENST00000623299 569 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 AC092192.1-201ENST00000633154 1018 ntBASIC2.31□□□□□ -2.04
HOXA9P31269 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA9P31269 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HOXA9P31269 Y_RNA.18-201ENST00000362461 102 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 U3.20-201ENST00000390909 217 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA9P31269 RPL7P34-201ENST00000433316 712 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 UBE2V1P13-201ENST00000436983 439 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AL592447.1-201ENST00000447592 540 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA9P31269 ATG12P2-201ENST00000456830 416 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 Y_RNA.638-201ENST00000459374 113 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 NDUFB4P2-201ENST00000509515 391 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 MRPS36P2-201ENST00000512569 299 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA9P31269 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXA9P31269 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXA9P31269 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA9P31269 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.3□□□□□ -2.04
HOXA9P31269 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXA9P31269 AC135628.1-201ENST00000568867 534 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AC105224.1-201ENST00000587055 421 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 BNIP3P23-201ENST00000599655 511 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AC025811.1-201ENST00000604312 472 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AC004067.1-201ENST00000608733 700 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AL360219.1-201ENST00000610230 366 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AL603758.1-201ENST00000618654 241 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 PCMTD1P7-201ENST00000634506 357 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AC099063.3-201ENST00000642066 185 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA9P31269 MTCO1P9-201ENST00000505577 1534 ntBASIC2.3□□□□□ -2.04
HOXA9P31269 AL137003.2-201ENST00000606924 2538 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXA9P31269 AC012321.1-201ENST00000561622 1588 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 CCT4P2-201ENST00000233836 1548 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 RNU6-500P-201ENST00000362349 107 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 Y_RNA.97-201ENST00000363094 102 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 HMGB1P11-201ENST00000413899 637 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA9P31269 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.29□□□□□ -2.04
HOXA9P31269 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.29□□□□□ -2.04
HOXA9P31269 AC098614.2-201ENST00000426040 255 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA9P31269 LARP1BP3-201ENST00000437229 869 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 COX6CP12-201ENST00000446748 202 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 DPPA3P1-201ENST00000448050 469 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 RNU7-125P-201ENST00000458760 62 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 RPL23AP42-201ENST00000471152 471 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC072039.1-201ENST00000477611 581 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC034222.1-201ENST00000494052 532 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC106872.3-201ENST00000495104 446 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA9P31269 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 DUXAP5-201ENST00000529668 529 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA9P31269 AC078814.3-201ENST00000553036 491 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA9P31269 AC008015.1-201ENST00000555505 465 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA9P31269 AC002400.1-201ENST00000569310 726 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC060771.1-201ENST00000582031 164 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA9P31269 AL355877.2-201ENST00000603670 358 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 AL449363.1-201ENST00000617815 186 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA9P31269 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA9P31269 AC093591.3-201ENST00000634516 308 ntBASIC2.29□□□□□ -2.04
HOXA9P31269 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA9P31269 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA9P31269 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 RNU6-637P-201ENST00000384050 107 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 RNU6-754P-201ENST00000391166 107 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 GSTA9P-201ENST00000406231 611 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 AL513331.1-201ENST00000411908 397 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 VPS26BP1-201ENST00000417155 755 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXA9P31269 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXA9P31269 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 MTND1P9-201ENST00000453775 944 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXA9P31269 TRBV1-201ENST00000476502 284 ntBASIC2.28□□□□□ -2.04
HOXA9P31269 MRPS33P3-201ENST00000513456 322 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms