Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC010468.3-201ENST00000508225 458 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL4A5P29400 RNU6-405P-201ENST00000516637 110 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 RNU6-467P-201ENST00000517027 110 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A5P29400 SUB1P4-201ENST00000566062 339 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A5P29400 AL161729.4-201ENST00000604650 476 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC096772.1-201ENST00000609146 564 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL4A5P29400 AC009812.4-201ENST00000569134 1805 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A5P29400 ZNF849P-201ENST00000594711 1566 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AL049641.1-201ENST00000441055 1948 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL4A5P29400 RNA5SP62-201ENST00000363457 110 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 SNORA67.1-201ENST00000364749 141 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 RNU4-91P-201ENST00000364778 135 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 MIR325-201ENST00000385260 98 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 RNU6-932P-201ENST00000391108 106 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 RNU2-28P-201ENST00000410457 189 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 HMGN1P14-201ENST00000412459 517 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 MTCO3P1-205ENST00000422088 832 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 MTND2P24-201ENST00000453434 806 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 BZW1P2-201ENST00000473537 826 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AL135752.1-201ENST00000479477 471 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC092902.1-201ENST00000486999 259 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.42□□□□□ -2.18
COL4A5P29400 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A5P29400 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A5P29400 AC080013.4-201ENST00000607624 649 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC004009.2-201ENST00000623016 728 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AC080188.3-201ENST00000624842 748 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 AL159972.1-201ENST00000625150 448 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 U6.101-201ENST00000637707 76 ntBASIC1.42□□□□□ -2.18
COL4A5P29400 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A5P29400 Z82195.2-201ENST00000612348 18351 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A5P29400 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL4A5P29400 MIR16-2-201ENST00000362117 81 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A5P29400 OR1L1-202ENST00000373686 1083 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 RNU6-878P-201ENST00000384578 110 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 MIR144-201ENST00000384886 86 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 MIR524-201ENST00000385242 87 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 SFR1P2-201ENST00000421841 730 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 AL445305.1-201ENST00000432577 575 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A5P29400 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A5P29400 RNFT1P2-201ENST00000443064 757 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A5P29400 RPL7P55-201ENST00000450522 746 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A5P29400 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A5P29400 AC108078.1-201ENST00000508073 725 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 AC025768.1-201ENST00000510057 267 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 AC022447.1-201ENST00000515358 464 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 RNA5SP135-201ENST00000517019 125 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A5P29400 AC006518.2-201ENST00000542513 940 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A5P29400 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.41□□□□□ -2.18
COL4A5P29400 AC023825.1-201ENST00000566704 1030 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A5P29400 AC005332.10-201ENST00000612725 619 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 MIR7515-201ENST00000637837 67 ntBASIC1.41□□□□□ -2.18
COL4A5P29400 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A5P29400 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
COL4A5P29400 SNORA6-201ENST00000384033 151 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A5P29400 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.4□□□□□ -2.19
COL4A5P29400 CCDC58P2-201ENST00000417131 366 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AC099548.1-201ENST00000421443 426 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AL590383.1-201ENST00000428602 75 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A5P29400 VN1R108P-201ENST00000431580 830 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 TAAR7P-201ENST00000436141 242 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.4□□□□□ -2.19
COL4A5P29400 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A5P29400 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A5P29400 AC010460.2-201ENST00000509054 677 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 MRPS36P2-201ENST00000512569 299 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A5P29400 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A5P29400 DUXAP5-201ENST00000529668 529 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AC124947.2-202ENST00000552735 133 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 AC009127.3-201ENST00000570531 403 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 MIR5194-201ENST00000582634 120 ntBASIC1.4□□□□□ -2.19
COL4A5P29400 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms