Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL450472.1-202ENST00000637286 180 ntBASIC4.89□□□□□ -1.63
HOXD8P13378 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
HOXD8P13378 AL049555.1-201ENST00000562834 1933 ntBASIC4.89□□□□□ -1.63
HOXD8P13378 AP000560.1-201ENST00000624150 1937 ntBASIC4.89□□□□□ -1.63
HOXD8P13378 DDX18P3-201ENST00000404856 2007 ntBASIC4.89□□□□□ -1.63
HOXD8P13378 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
HOXD8P13378 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 Y_RNA.200-201ENST00000364018 102 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXD8P13378 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXD8P13378 RNU6-1025P-201ENST00000410629 104 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 RNU2-14P-201ENST00000411053 191 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 AL513331.1-201ENST00000411908 397 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 AL157831.1-201ENST00000426134 473 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 MTND3P9-201ENST00000429526 346 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 PTMAP3-201ENST00000447474 330 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 SNORA84-201ENST00000459229 133 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 AK3P2-201ENST00000507976 429 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 AL592156.1-201ENST00000508758 304 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 RNA5SP49-201ENST00000516450 115 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 AL590705.4-201ENST00000532209 134 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 MIR4429-201ENST00000580105 73 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 RN7SL600P-201ENST00000581811 299 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 AP000787.2-201ENST00000604432 568 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 FAM27D1-201ENST00000612308 341 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 AC243829.7-201ENST00000633081 225 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 RLIMP1-201ENST00000339626 1680 ntBASIC4.88□□□□□ -1.63
HOXD8P13378 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXD8P13378 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXD8P13378 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
HOXD8P13378 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD8P13378 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD8P13378 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD8P13378 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HOXD8P13378 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD8P13378 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXD8P13378 AC007685.1-201ENST00000329806 452 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 RNU6-1266P-201ENST00000362794 105 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 RNU1-64P-201ENST00000365443 163 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AL359837.1-201ENST00000381357 287 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 RNU6-1074P-201ENST00000383995 104 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 RNU6-746P-201ENST00000384112 109 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 Y_RNA.458-201ENST00000384240 102 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 MIR153-1-201ENST00000384914 90 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 RNA5SP171-201ENST00000391071 115 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 PPIAP31-201ENST00000405422 495 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 RNA5SP36-201ENST00000410197 133 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD8P13378 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 RPL30P10-201ENST00000488148 337 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 AC020593.1-201ENST00000507399 299 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 SCARNA24.2-201ENST00000516968 130 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD8P13378 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AC007458.1-201ENST00000542812 373 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD8P13378 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXD8P13378 MIR5696-201ENST00000578474 85 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXD8P13378 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXD8P13378 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXD8P13378 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD8P13378 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD8P13378 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXD8P13378 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD8P13378 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXD8P13378 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HOXD8P13378 FAM91A3P-201ENST00000456826 2544 ntBASIC4.87□□□□□ -1.63
HOXD8P13378 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXD8P13378 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HOXD8P13378 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXD8P13378 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXD8P13378 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HOXD8P13378 RNA5SP52-201ENST00000362448 134 ntBASIC4.86□□□□□ -1.63
HOXD8P13378 RNU1-94P-201ENST00000362627 173 ntBASIC4.86□□□□□ -1.63
HOXD8P13378 RN7SKP280-201ENST00000364196 304 ntBASIC4.86□□□□□ -1.63
HOXD8P13378 Y_RNA.358-201ENST00000365491 99 ntBASIC4.86□□□□□ -1.63
HOXD8P13378 RNU1-63P-201ENST00000383902 164 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms