Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FAM206BP-201ENST00000510179 541 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC046134.1-201ENST00000514454 666 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.65□□□□□ -1.83
PHGDHO43175 RNU6-875P-201ENST00000516488 106 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC009902.1-201ENST00000519351 183 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.65□□□□□ -1.83
PHGDHO43175 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PHGDHO43175 HMGB1P14-201ENST00000557424 591 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AMZ2P1-203ENST00000565833 850 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.65□□□□□ -1.83
PHGDHO43175 MIR3609-201ENST00000582661 80 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 Y_RNA.804-201ENST00000615262 101 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC068831.7-201ENST00000616954 363 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.65□□□□□ -1.83
PHGDHO43175 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.65□□□□□ -1.83
PHGDHO43175 AC121333.1-201ENST00000567488 2709 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 AC007656.2-201ENST00000624902 4547 ntBASIC3.65□□□□□ -1.83
PHGDHO43175 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PHGDHO43175 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.65□□□□□ -1.83
PHGDHO43175 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PHGDHO43175 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.64□□□□□ -1.83
PHGDHO43175 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 AL353746.1-201ENST00000566293 6881 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 U3.12-201ENST00000364498 214 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 RNU6-1303P-201ENST00000364841 107 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 MIR30B-201ENST00000384850 88 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 RNU6-510P-201ENST00000391239 108 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 EIF4E2P1-201ENST00000393781 255 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 RNU6-628P-201ENST00000410675 107 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 RPLP0P7-201ENST00000416050 667 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.64□□□□□ -1.83
PHGDHO43175 USP9YP20-201ENST00000419224 558 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 AL139247.1-201ENST00000422768 325 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.64□□□□□ -1.83
PHGDHO43175 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.64□□□□□ -1.83
PHGDHO43175 ANP32BP2-201ENST00000454525 545 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.64□□□□□ -1.83
PHGDHO43175 HMGB1P30-201ENST00000492455 606 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.64□□□□□ -1.83
PHGDHO43175 UBE2CP3-201ENST00000502715 450 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.64□□□□□ -1.83
PHGDHO43175 SNORA19.2-201ENST00000516013 114 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.64□□□□□ -1.83
PHGDHO43175 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.64□□□□□ -1.83
PHGDHO43175 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.64□□□□□ -1.83
PHGDHO43175 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 AC087241.2-201ENST00000535801 324 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.64□□□□□ -1.83
PHGDHO43175 AC087499.8-201ENST00000578406 226 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 MIR3941-201ENST00000582572 103 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.64□□□□□ -1.83
PHGDHO43175 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.64□□□□□ -1.83
PHGDHO43175 HSPE1P7-201ENST00000604681 321 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 CTHRC1P1-201ENST00000605383 469 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.64□□□□□ -1.83
PHGDHO43175 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.64□□□□□ -1.83
PHGDHO43175 ZYXP1-201ENST00000617638 118 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 AC073308.1-201ENST00000623696 305 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 RNA5SP196-201ENST00000625967 102 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.64□□□□□ -1.83
PHGDHO43175 MFSD8-236ENST00000641509 4050 ntBASIC3.64□□□□□ -1.83
PHGDHO43175 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PHGDHO43175 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.64□□□□□ -1.83
PHGDHO43175 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PHGDHO43175 MIR412-201ENST00000362142 91 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 RNU6-845P-201ENST00000362578 103 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 RNA5SP295-201ENST00000362655 121 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 SNORD3E-201ENST00000362899 217 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PHGDHO43175 RN7SKP263-201ENST00000411194 309 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 HSPE1P1-201ENST00000421494 318 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.63□□□□□ -1.83
PHGDHO43175 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.63□□□□□ -1.83
PHGDHO43175 AC007560.1-201ENST00000426912 237 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 AL591419.1-201ENST00000427423 339 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 MYL8P-204ENST00000431574 518 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 IFNA20P-201ENST00000436840 528 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.63□□□□□ -1.83
PHGDHO43175 AC103987.1-201ENST00000473394 348 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.63□□□□□ -1.83
PHGDHO43175 RNU6-572P-201ENST00000516724 80 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 SNORA31.19-201ENST00000517079 126 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 CYCSP30-201ENST00000546447 172 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 TRAV37-201ENST00000553906 342 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.63□□□□□ -1.83
PHGDHO43175 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.63□□□□□ -1.83
PHGDHO43175 AL031601.2-202ENST00000622650 282 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.63□□□□□ -1.83
PHGDHO43175 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.63□□□□□ -1.83
PHGDHO43175 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
PHGDHO43175 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PHGDHO43175 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms