Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX1O00570 RNU2-14P-201ENST00000411053 191 ntBASIC4.75□□□□□ -1.65
SOX1O00570 RNU6-130P-201ENST00000411112 103 ntBASIC4.75□□□□□ -1.65
SOX1O00570 GNG5P5-201ENST00000420444 220 ntBASIC4.75□□□□□ -1.65
SOX1O00570 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 VTI1BP4-201ENST00000427516 527 ntBASIC4.75□□□□□ -1.65
SOX1O00570 MYL8P-204ENST00000431574 518 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AC092573.2-201ENST00000434546 243 ntBASIC4.75□□□□□ -1.65
SOX1O00570 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX1O00570 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX1O00570 AC004938.1-201ENST00000438468 308 ntBASIC4.75□□□□□ -1.65
SOX1O00570 RPL26P6-201ENST00000440913 438 ntBASIC4.75□□□□□ -1.65
SOX1O00570 U8.21-201ENST00000459536 136 ntBASIC4.75□□□□□ -1.65
SOX1O00570 RN7SL517P-201ENST00000462240 305 ntBASIC4.75□□□□□ -1.65
SOX1O00570 RPS29P2-201ENST00000479278 136 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SOX1O00570 AC091144.1-201ENST00000519573 138 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX1O00570 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX1O00570 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX1O00570 AC130289.1-201ENST00000577321 73 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AC073410.2-201ENST00000603240 332 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AC107294.1-201ENST00000609524 467 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AP001005.3-201ENST00000622049 129 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AC243829.7-201ENST00000633081 225 ntBASIC4.75□□□□□ -1.65
SOX1O00570 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SOX1O00570 AC100778.3-201ENST00000580060 1750 ntBASIC4.75□□□□□ -1.65
SOX1O00570 AC010266.2-201ENST00000564741 3255 ntBASIC4.75□□□□□ -1.65
SOX1O00570 SMG1P4-204ENST00000523028 4131 ntBASIC4.74□□□□□ -1.65
SOX1O00570 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX1O00570 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.74□□□□□ -1.65
SOX1O00570 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
SOX1O00570 AP000560.1-201ENST00000624150 1937 ntBASIC4.74□□□□□ -1.65
SOX1O00570 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
SOX1O00570 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX1O00570 RNU6-395P-201ENST00000365662 106 ntBASIC4.74□□□□□ -1.65
SOX1O00570 Y_RNA.500-201ENST00000384466 111 ntBASIC4.74□□□□□ -1.65
SOX1O00570 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SOX1O00570 SNORD58.1-201ENST00000391313 66 ntBASIC4.74□□□□□ -1.65
SOX1O00570 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX1O00570 EI24P1-201ENST00000416584 867 ntBASIC4.74□□□□□ -1.65
SOX1O00570 MTATP6P4-201ENST00000427725 675 ntBASIC4.74□□□□□ -1.65
SOX1O00570 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 AC026784.1-201ENST00000507986 352 ntBASIC4.74□□□□□ -1.65
SOX1O00570 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SOX1O00570 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX1O00570 AL157871.3-201ENST00000557231 293 ntBASIC4.74□□□□□ -1.65
SOX1O00570 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.74□□□□□ -1.65
SOX1O00570 MIR8076-201ENST00000611401 83 ntBASIC4.74□□□□□ -1.65
SOX1O00570 AC004852.3-201ENST00000614131 326 ntBASIC4.74□□□□□ -1.65
SOX1O00570 AC004792.1-201ENST00000614523 137 ntBASIC4.74□□□□□ -1.65
SOX1O00570 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 AL034408.1-202ENST00000636088 415 ntBASIC4.74□□□□□ -1.65
SOX1O00570 U6.105-201ENST00000637379 88 ntBASIC4.74□□□□□ -1.65
SOX1O00570 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX1O00570 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
SOX1O00570 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX1O00570 AC016588.2-201ENST00000632484 3021 ntBASIC4.74□□□□□ -1.65
SOX1O00570 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX1O00570 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SOX1O00570 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX1O00570 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SOX1O00570 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SOX1O00570 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
SOX1O00570 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX1O00570 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX1O00570 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SOX1O00570 Y_RNA.27-201ENST00000362540 103 ntBASIC4.73□□□□□ -1.65
SOX1O00570 Y_RNA.33-201ENST00000362591 102 ntBASIC4.73□□□□□ -1.65
SOX1O00570 RNU6-280P-201ENST00000364145 104 ntBASIC4.73□□□□□ -1.65
SOX1O00570 Y_RNA.237-201ENST00000364439 102 ntBASIC4.73□□□□□ -1.65
SOX1O00570 Y_RNA.270-201ENST00000364693 104 ntBASIC4.73□□□□□ -1.65
SOX1O00570 Y_RNA.352-201ENST00000365439 102 ntBASIC4.73□□□□□ -1.65
SOX1O00570 RNVU1-14-201ENST00000384770 164 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AP000907.1-201ENST00000428428 510 ntBASIC4.73□□□□□ -1.65
SOX1O00570 CKS1BP5-201ENST00000434172 273 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AC104332.1-201ENST00000440471 797 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AL139109.1-201ENST00000455491 297 ntBASIC4.73□□□□□ -1.65
SOX1O00570 RPL30P10-201ENST00000488148 337 ntBASIC4.73□□□□□ -1.65
SOX1O00570 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX1O00570 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX1O00570 AL121603.1-201ENST00000553815 142 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AL161713.1-201ENST00000555538 145 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AC010900.2-201ENST00000604508 210 ntBASIC4.73□□□□□ -1.65
SOX1O00570 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX1O00570 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.73□□□□□ -1.65
SOX1O00570 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SOX1O00570 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX1O00570 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX1O00570 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX1O00570 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms