Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPL30P5-201ENST00000494923 336 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 TTC39CP1-201ENST00000512513 755 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 LRRC34P2-201ENST00000514850 553 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-914P-201ENST00000516749 109 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC026403.1-201ENST00000518938 295 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MTND4P7-201ENST00000523876 130 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 TOMM20P2-201ENST00000540082 421 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 TRAV28-201ENST00000557548 323 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC006130.2-201ENST00000586202 326 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL670379.4-201ENST00000605279 254 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AL158032.1-201ENST00000605401 106 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 AC008725.1-201ENST00000605123 2263 ntBASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV7S3A2A0A539 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC118273.1-201ENST00000525324 3006 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC007785.2-201ENST00000598627 1916 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.86-201ENST00000363020 111 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.160-201ENST00000363677 92 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-82P-201ENST00000363970 107 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 U3.12-201ENST00000364498 214 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-116P-201ENST00000384042 109 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 MIR3074-201ENST00000384885 81 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-332P-201ENST00000391193 108 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 NEK4P1-201ENST00000433383 879 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 FABP5P15-201ENST00000453566 214 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 TRBV1-201ENST00000476502 284 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC012181.1-201ENST00000479895 423 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RPL21P99-201ENST00000480369 423 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AP001086.1-201ENST00000494882 321 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 PSMA2P1-201ENST00000526365 646 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC007424.1-203ENST00000554613 687 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 MTCO3P23-201ENST00000561363 289 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC093227.2-201ENST00000589357 285 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 BNIP3P9-201ENST00000603714 553 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC009570.1-201ENST00000609599 745 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC091903.1-201ENST00000624322 454 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 HSPA8P4-201ENST00000511877 1920 ntBASIC3.31□□□□□ -1.88
TCRBV7S3A2A0A539 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-522P-201ENST00000364497 107 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 RNU5E-4P-201ENST00000364931 120 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 RNU4-66P-201ENST00000365199 138 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.399-201ENST00000383955 105 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 EEF1A1P40-201ENST00000412883 573 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC063979.1-201ENST00000415539 377 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC092047.1-201ENST00000424997 240 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AL451062.2-201ENST00000427515 271 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 GOT2P5-201ENST00000433995 546 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 RPL37P6-201ENST00000460682 294 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 CCDC34P1-201ENST00000507441 517 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC010486.1-201ENST00000511793 424 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms