Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV30A0A087WSZ9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV30A0A087WSZ9 AC005668.1-201ENST00000571142 476 ntBASIC0.84□□□□□ -2.27
TRAV30A0A087WSZ9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV30A0A087WSZ9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV30A0A087WSZ9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV30A0A087WSZ9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
TRAV30A0A087WSZ9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 MIR513A1-201ENST00000385138 129 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 SNORA17.3-201ENST00000391159 129 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AC245517.4-201ENST00000448601 281 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 HMGN2P18-201ENST00000450680 270 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AC092902.1-201ENST00000486999 259 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 RNU6-902P-201ENST00000517212 91 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AL161729.4-201ENST00000604650 476 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 MIR6130-201ENST00000619419 109 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 MIR5739-201ENST00000619803 80 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 U1.36-201ENST00000620684 176 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 AL512506.2-201ENST00000624472 458 ntBASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
TRAV30A0A087WSZ9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 RNU6-1222P-201ENST00000384615 107 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 MIR649-201ENST00000384843 97 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 MIR518D-201ENST00000385014 87 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 RNA5SP465-201ENST00000391195 109 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 RN7SKP284-201ENST00000411002 343 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 SNRPEP10-201ENST00000420249 274 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 CYP2C59P-201ENST00000457790 269 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC005908.1-201ENST00000468701 347 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC093852.1-201ENST00000503587 266 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 RN7SKP219-201ENST00000516825 296 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC005832.3-201ENST00000537929 631 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC124947.2-202ENST00000552735 133 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC104763.2-201ENST00000604179 382 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 TUG1_1.1-201ENST00000610654 145 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.82□□□□□ -2.28
TRAV30A0A087WSZ9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 MIR378A-201ENST00000362177 66 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 MIR764-201ENST00000390811 85 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 RNU2-36P-201ENST00000410361 191 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AP1B1P2-201ENST00000416196 106 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AL160275.3-201ENST00000423876 471 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC108667.1-201ENST00000428618 249 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 Z82210.1-201ENST00000440037 231 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 GDI2P2-201ENST00000445131 608 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 LARP1BP2-201ENST00000486594 519 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 OR8K4P-201ENST00000534608 872 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AP001542.2-201ENST00000593141 364 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 NIFKP6-201ENST00000598115 845 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC025754.2-201ENST00000606491 432 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC117490.2-201ENST00000610042 594 ntBASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV30A0A087WSZ9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 ZNF680P1-201ENST00000436625 1469 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 AL359854.1-201ENST00000614203 1594 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 AL391987.6-201ENST00000305671 199 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 RNU5A-1-201ENST00000362698 116 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 RNU6-1151P-201ENST00000384684 107 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 UBE2V1P5-201ENST00000440070 405 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 RPL23AP16-201ENST00000441715 421 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 COX6CP18-201ENST00000448769 222 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 HMGN3P1-201ENST00000453847 193 ntBASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV30A0A087WSZ9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms