Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AL138889.2-201ENST00000603883 242 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 uc_338.34-201ENST00000617467 174 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC100810.6-201ENST00000638068 285 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 AC118273.1-201ENST00000525324 3006 ntBASIC3.38□□□□□ -1.87
DTX4Q9Y2E6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 Y_RNA.157-201ENST00000363638 102 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNU6-512P-201ENST00000364438 103 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNU6-38P-201ENST00000384085 107 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 SNORA5A-201ENST00000384111 134 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC007919.1-201ENST00000429380 217 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AL358232.1-201ENST00000448030 501 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC092001.1-201ENST00000453012 261 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNU6-333P-201ENST00000459117 107 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 SNORA70.18-201ENST00000516696 98 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNA5SP471-201ENST00000516971 106 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AL137161.1-201ENST00000532231 390 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 BNIP3P6-201ENST00000549284 499 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 KLKP1-201ENST00000595979 403 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC013553.2-201ENST00000604244 589 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AL390240.1-201ENST00000612950 384 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AL357559.1-201ENST00000622228 274 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 AC090740.1-201ENST00000623193 2262 ntBASIC3.37□□□□□ -1.87
DTX4Q9Y2E6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 SNORD9-201ENST00000362566 104 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 RNU4-20P-201ENST00000365601 151 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AL139039.1-201ENST00000401900 692 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AP000567.1-201ENST00000406413 156 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC080125.1-201ENST00000414888 684 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 Z85995.1-201ENST00000415547 335 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 DBIP2-201ENST00000419076 262 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC009237.8-201ENST00000445492 379 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC104058.1-201ENST00000448028 297 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 RPS20P22-201ENST00000473700 357 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 RPL23AP11-201ENST00000475260 469 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 TRBV1-201ENST00000476502 284 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AL160314.1-201ENST00000490836 438 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC091885.1-201ENST00000506658 268 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 MIR4424-201ENST00000585257 86 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 AC098826.3-201ENST00000603823 466 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 MIR15A-201ENST00000607334 83 ntBASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DTX4Q9Y2E6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 YPEL5P1-201ENST00000419731 367 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 AL160275.3-201ENST00000423876 471 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 SRIP2-201ENST00000428470 166 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 AC093019.1-201ENST00000443135 252 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 RPS3AP46-201ENST00000448352 682 ntBASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.35□□□□□ -1.87
DTX4Q9Y2E6 SCARNA18-201ENST00000459004 134 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms