Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 BX005214.3-202ENST00000619809 325 ntBASIC5.4□□□□□ -1.54
PCDHGC3Q9UN70 ASNSP1-201ENST00000518311 1939 ntBASIC5.4□□□□□ -1.55
PCDHGC3Q9UN70 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC3Q9UN70 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC3Q9UN70 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PCDHGC3Q9UN70 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC3Q9UN70 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 Y_RNA.400-201ENST00000383963 111 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 Y_RNA.488-201ENST00000384403 102 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 MIR10B-201ENST00000385011 110 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 RNU6-1168P-201ENST00000390831 104 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 MTHFD2P2-201ENST00000407725 247 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 RNA5SP31-201ENST00000411144 127 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 Y_RNA.629-201ENST00000411368 105 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AC007738.1-201ENST00000413892 348 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 BX323845.1-201ENST00000432417 179 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 SSXP4-201ENST00000451349 245 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 MED28P6-201ENST00000558776 231 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 MIR5695-201ENST00000579717 85 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AC053481.4-201ENST00000583164 216 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AC005176.2-201ENST00000596933 147 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 BPIFA4P-203ENST00000603168 689 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 AC024581.2-201ENST00000619986 252 ntBASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC3Q9UN70 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 RNU5F-3P-201ENST00000363767 117 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 RNU6-1145P-201ENST00000384246 107 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 RNU6-159P-201ENST00000391080 106 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 SNORA77-201ENST00000408716 125 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 RN7SKP229-201ENST00000410465 302 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AL355433.1-201ENST00000422804 300 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AC024067.1-201ENST00000426199 223 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 COX6B1P7-201ENST00000430845 235 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 RPS29P9-201ENST00000440360 171 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AL354714.3-201ENST00000447284 493 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 MRPS10P1-201ENST00000448483 130 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 TRAV28-201ENST00000557548 323 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AC006065.5-201ENST00000623427 349 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 AC104623.2-202ENST00000623477 4002 ntBASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC3Q9UN70 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC093591.2-201ENST00000565254 3843 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC135776.4-201ENST00000624300 1904 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 Y_RNA.217-201ENST00000364214 105 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 SNORA29-201ENST00000384183 140 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 Y_RNA.568-201ENST00000384742 113 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 MIR329-1-201ENST00000385028 80 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 WARS2P1-201ENST00000429678 537 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AL162725.1-201ENST00000435405 301 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 Y_RNA.641-201ENST00000459414 105 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 BX284632.1-201ENST00000478218 541 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 RN7SL727P-201ENST00000482164 296 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC140059.1-201ENST00000489238 361 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 RNA5SP34-201ENST00000516887 130 ntBASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGC3Q9UN70 AL391261.3-201ENST00000557194 520 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms