Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 CIR1P3-201ENST00000405137 479 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 RNU2-36P-201ENST00000410361 191 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AL513331.1-201ENST00000411908 397 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 USP9YP28-201ENST00000435142 589 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 DDX3P2-201ENST00000446138 111 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 ELOCP23-201ENST00000452014 332 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 RPL21P8-201ENST00000465083 535 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AC245166.1-201ENST00000521012 253 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 MIR4474-201ENST00000579189 78 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AC174048.1-201ENST00000603389 144 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 AC126118.1-201ENST00000607744 628 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 MTND5P17-201ENST00000418405 1603 ntBASIC3.52□□□□□ -1.85
HDAC6Q9UBN7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 U3.6-201ENST00000363622 211 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 DEFB109C-201ENST00000382575 264 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 DEFB109B-201ENST00000382656 264 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RNU1-39P-201ENST00000383897 165 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RNU6-641P-201ENST00000384006 107 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RNU6-606P-201ENST00000384721 111 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 MIR514A1-201ENST00000385133 98 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 MTCO2P19-201ENST00000427513 598 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 HMGB3P12-201ENST00000438745 556 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC126389.1-201ENST00000477436 290 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RN7SKP258-201ENST00000517151 304 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC009812.2-201ENST00000517657 457 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AP001804.3-201ENST00000525146 880 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 MIR4513-201ENST00000581077 86 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 MTATP6P3-201ENST00000581686 676 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC107304.1-201ENST00000604229 296 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 uc_338.25-201ENST00000613756 156 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC004696.1-201ENST00000614345 607 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 MTND5P7-201ENST00000413558 1798 ntBASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.51□□□□□ -1.85
HDAC6Q9UBN7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 SNORA54-201ENST00000384281 123 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 RNU6-39P-201ENST00000384344 107 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 RNU6-387P-201ENST00000411331 105 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AL451054.2-201ENST00000420896 202 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 USP9YP18-201ENST00000425912 695 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC107083.1-201ENST00000439643 279 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 MTATP6P30-201ENST00000443540 664 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 RPL37P6-201ENST00000460682 294 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 SNORD27.1-201ENST00000516319 72 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AL391646.1-201ENST00000603860 190 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AP001330.5-201ENST00000607176 411 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 MIR7106-201ENST00000612419 65 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 uc_338.11-201ENST00000619132 160 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC007998.5-201ENST00000622938 237 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC099506.2-201ENST00000623074 221 ntBASIC3.5□□□□□ -1.85
HDAC6Q9UBN7 AC139792.3-201ENST00000623525 224 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms