Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SNORA70.19-201ENST00000516717 90 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC100870.1-201ENST00000522035 505 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AF235103.2-201ENST00000525753 346 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 OR5B19P-201ENST00000531766 928 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 RAB11AP2-201ENST00000545905 639 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC128657.1-201ENST00000549459 145 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 FRG1KP-201ENST00000623592 341 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 MTND1P37-201ENST00000636562 264 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL7P26-201ENST00000333817 754 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR30E-201ENST00000362104 92 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 Y_RNA.279-201ENST00000364763 95 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AP002088.1-201ENST00000382740 395 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL354719.1-201ENST00000406535 843 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 MTATP6P16-201ENST00000434543 526 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SEPT14P3-201ENST00000439401 183 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL732372.2-207ENST00000445840 183 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC140076.1-201ENST00000449897 361 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SNRPGP6-201ENST00000451124 220 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SEPT14P2-201ENST00000453405 183 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-261P-201ENST00000459506 102 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RPS20P20-201ENST00000460498 340 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL23AP67-201ENST00000465341 474 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SNRPGP3-201ENST00000469405 227 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RPS27AP1-201ENST00000475545 471 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RPS4XP22-201ENST00000480755 780 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 MTND3P22-201ENST00000510932 243 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SEPT14P4-201ENST00000513445 186 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RNA5SP401-201ENST00000515920 127 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU2-10P-201ENST00000516375 211 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 FO082796.1-201ENST00000523795 183 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 OR4R1P-201ENST00000529879 463 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC007458.1-201ENST00000542812 373 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 GLYCAM1-201ENST00000546596 285 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR3200-201ENST00000580767 85 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC006557.5-201ENST00000603126 811 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC004696.1-201ENST00000614345 607 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL136221.1-201ENST00000621449 509 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC093648.1-201ENST00000623546 606 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC006020.1-201ENST00000420179 1854 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 AL513302.2-201ENST00000562313 1842 ntBASIC3.47□□□□□ -1.85
NCKIPSDQ9NZQ3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.46□□□□□ -1.85
NCKIPSDQ9NZQ3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 HSPE1P11-201ENST00000339579 310 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 RNU1-75P-201ENST00000347264 129 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 MIR490-201ENST00000384865 128 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AL359634.1-202ENST00000404721 284 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 RNA5SP120-201ENST00000410900 112 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 Z92545.1-201ENST00000411782 234 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AC017079.2-201ENST00000416102 485 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 MTND1P14-201ENST00000427400 950 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 OR2AS1P-201ENST00000427827 319 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AL590383.1-201ENST00000428602 75 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AC092001.1-201ENST00000453012 261 ntBASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.46□□□□□ -1.86
NCKIPSDQ9NZQ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms