Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AL360270.2-201ENST00000562952 5985 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AL590240.1-201ENST00000334118 313 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 Y_RNA.60-201ENST00000362831 98 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 SNORA36A-201ENST00000384221 132 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 RPL23AP48-201ENST00000406913 488 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 RN7SKP286-201ENST00000410894 299 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC007215.1-201ENST00000464893 276 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC098869.1-201ENST00000481627 292 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 SNORA74.1-201ENST00000516320 180 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 MIR212-201ENST00000586026 110 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 SNORD113-5-201ENST00000607261 78 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC011373.1-201ENST00000607270 237 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC005520.5-201ENST00000613926 164 ntBASIC6.54□□□□□ -1.36
RTN4Q9NQC3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RTN4Q9NQC3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 snoU2_19.2-201ENST00000363024 80 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 SNORD113-8-201ENST00000363497 74 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 RNA5SP211-201ENST00000365516 117 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 Y_RNA.595-201ENST00000410403 105 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 RPL12P11-201ENST00000439970 501 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 HMGB1P35-201ENST00000503360 598 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 MRPS21P8-201ENST00000569196 235 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 AC011476.5-201ENST00000615594 130 ntBASIC6.53□□□□□ -1.36
RTN4Q9NQC3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.53□□□□□ -1.36
RTN4Q9NQC3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 BX322639.1-202ENST00000423987 2213 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 Y_RNA.230-201ENST00000364348 109 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RNU6-926P-201ENST00000384075 107 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RNU6-1145P-201ENST00000384246 107 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RNA5SP252-201ENST00000391131 119 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 SNORA53-201ENST00000391141 249 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RNA5SP156-201ENST00000410250 110 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RAC1P3-201ENST00000416129 580 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AL590139.1-201ENST00000416267 400 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RPL35AP31-201ENST00000418340 337 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AL162151.2-201ENST00000448875 158 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 RN7SL502P-201ENST00000481857 290 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 SMIM12P1-201ENST00000603004 274 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 SNRPGP20-201ENST00000604477 205 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AL162713.1-201ENST00000604480 262 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AC073657.2-201ENST00000605661 303 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 AC010999.1-201ENST00000611856 324 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 MIR6885-201ENST00000612241 66 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.52□□□□□ -1.37
RTN4Q9NQC3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTN4Q9NQC3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTN4Q9NQC3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RTN4Q9NQC3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTN4Q9NQC3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RTN4Q9NQC3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RTN4Q9NQC3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTN4Q9NQC3 RNA5SP110-201ENST00000362638 115 ntBASIC6.51□□□□□ -1.37
RTN4Q9NQC3 Y_RNA.237-201ENST00000364439 102 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms