Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AC243972.3-201ENST00000539655 198 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 ZNF321P-202ENST00000550843 495 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.6-201ENST00000603753 252 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.11-201ENST00000604059 253 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AC008162.1-201ENST00000604718 254 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.1-201ENST00000604752 252 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.5-201ENST00000605253 252 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.12-201ENST00000605291 253 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.8-201ENST00000605353 252 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AC105129.3-201ENST00000605455 485 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL670379.7-201ENST00000605823 252 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AL589743.7-201ENST00000612637 233 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 MIR7844-201ENST00000616161 122 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AC006338.1-201ENST00000618453 749 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AC131159.1-201ENST00000621854 213 ntBASIC2.63□□□□□ -1.99
DDX47Q9H0S4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
DDX47Q9H0S4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 SMIM11P1-201ENST00000369586 178 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 RNU6-817P-201ENST00000391083 104 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 MTCYBP36-201ENST00000404146 440 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC019097.1-201ENST00000424783 735 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 OSTCP8-201ENST00000445117 448 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 SSXP1-201ENST00000453640 473 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AP000852.1-201ENST00000472460 573 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC080014.1-201ENST00000496877 1201 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 EIF4EP3-201ENST00000498782 656 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AF131216.2-201ENST00000512316 564 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC012435.1-202ENST00000568772 240 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 MIR5697-201ENST00000578045 78 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC024619.4-201ENST00000580924 316 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 NRBF2P5-201ENST00000603087 788 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AL353778.1-201ENST00000603149 408 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AL355598.1-201ENST00000604169 202 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AC034229.4-201ENST00000607861 441 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 AL589994.2-201ENST00000621124 579 ntBASIC2.62□□□□□ -1.99
DDX47Q9H0S4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX47Q9H0S4 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 SNORD62.1-201ENST00000362541 86 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 RNU6-288P-201ENST00000363690 104 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 RNU6-188P-201ENST00000364207 107 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 RNU6-658P-201ENST00000384606 106 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 MIR23A-201ENST00000385245 73 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AC093106.2-201ENST00000428212 385 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AL592045.1-201ENST00000429867 352 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 HMGB3P12-201ENST00000438745 556 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 MTATP6P7-201ENST00000453315 681 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 ZNF114P1-201ENST00000453500 292 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 TRBV1-201ENST00000476502 284 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 MTND1P3-201ENST00000484956 952 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 RPS15AP34-201ENST00000487776 387 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AC097462.2-201ENST00000504623 481 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 MTATP6P24-201ENST00000576835 677 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 MIR3117-201ENST00000584034 78 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 AP002791.1-201ENST00000623291 381 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 MIR3199-2-201ENST00000636243 86 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
DDX47Q9H0S4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX47Q9H0S4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX47Q9H0S4 NACAP2-201ENST00000318548 624 ntBASIC2.6□□□□□ -1.99
DDX47Q9H0S4 RNU5E-6P-201ENST00000365574 115 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms