Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MIR6716-201ENST00000613413 80 ntBASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 AC103858.2-201ENST00000621471 543 ntBASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 MIR7702-201ENST00000621931 59 ntBASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 AL136964.1-201ENST00000622038 2990 ntBASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXP3Q9BZS1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.46□□□□□ -1.69
FOXP3Q9BZS1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXP3Q9BZS1 AC008725.1-201ENST00000605123 2263 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.257-201ENST00000364596 102 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.424-201ENST00000384063 103 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.512-201ENST00000384518 102 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 SNORD66.1-201ENST00000391230 76 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 BX842559.1-201ENST00000419615 532 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AL138785.1-201ENST00000425821 331 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AL158071.1-201ENST00000430315 461 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 HSFY6P-201ENST00000445573 403 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AL360271.2-201ENST00000447710 161 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 PRDX3P3-201ENST00000447765 522 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC006517.1-201ENST00000480485 328 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC108145.1-201ENST00000503770 153 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC026402.1-201ENST00000513642 170 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 RNU6-388P-201ENST00000517012 105 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 RNU6-389P-201ENST00000517048 105 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC131281.1-201ENST00000522984 164 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC126177.3-201ENST00000551839 688 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 RPL23AP87-202ENST00000573039 466 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 AC093227.2-201ENST00000589357 285 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 ARF4P1-201ENST00000605447 541 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 U73479.1-201ENST00000618062 168 ntBASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXP3Q9BZS1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-874P-201ENST00000362390 105 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-596P-201ENST00000365395 98 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-76P-201ENST00000384060 104 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.489-201ENST00000384410 101 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 MIR659-201ENST00000384963 97 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-882P-201ENST00000391025 103 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 MIR1252-201ENST00000408861 65 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL133396.1-201ENST00000432048 687 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL451050.1-201ENST00000450126 415 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AC107222.1-201ENST00000510899 637 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-408P-201ENST00000515910 100 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNY3P15-201ENST00000516297 97 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RN7SKP21-201ENST00000516503 220 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-914P-201ENST00000516749 109 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-840P-201ENST00000517275 65 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AC007991.1-201ENST00000522680 631 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 HSBP1P1-201ENST00000555205 166 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL161713.1-201ENST00000555538 145 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 BNIP3P5-201ENST00000562290 498 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 LRRC37A5P-203ENST00000580181 585 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AC016727.2-201ENST00000603988 621 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 RNU6-85P-201ENST00000605989 107 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AC005344.1-201ENST00000613391 459 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 AL031601.2-202ENST00000622650 282 ntBASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXP3Q9BZS1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.396-201ENST00000383949 103 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.534-201ENST00000384599 112 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 RNU6-837P-201ENST00000391056 108 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 RNU6-174P-201ENST00000410406 106 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 HMGB1P9-201ENST00000429856 646 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 HMGB1P27-201ENST00000431429 603 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 OSTCP8-201ENST00000445117 448 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 PCNPP5-201ENST00000452246 481 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 PCMTD1P1-201ENST00000455560 355 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AL583843.1-201ENST00000456070 346 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms