Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DDX10P1-201ENST00000448545 1933 ntBASIC4.3□□□□□ -1.72
PTPN18Q99952 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PTPN18Q99952 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 RNU6-960P-201ENST00000364056 120 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 RNU5E-6P-201ENST00000365574 115 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 RNU6-310P-201ENST00000384655 107 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 RNU2-43P-201ENST00000410306 190 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 RNU4-46P-201ENST00000410818 138 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 RNU6-387P-201ENST00000411331 105 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 SSXP9-201ENST00000417503 292 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN18Q99952 CECR9-201ENST00000453421 199 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 U8.20-201ENST00000459445 131 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN18Q99952 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN18Q99952 MLLT10P2-201ENST00000506434 249 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 MRPS35P2-201ENST00000508242 191 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 FTH1P9-201ENST00000513251 355 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 IGKV2-38-201ENST00000517443 247 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 RANP9-201ENST00000519957 271 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 IGLV3-26-201ENST00000520756 302 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 DEFB108D-201ENST00000527787 222 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN18Q99952 MIR4513-201ENST00000581077 86 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AC012493.2-201ENST00000595083 291 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AL034351.1-201ENST00000605288 668 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 PRR13P7-201ENST00000605538 430 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AC007390.2-201ENST00000606229 3803 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AL773545.4-201ENST00000637262 310 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 AL513478.4-201ENST00000641636 310 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN18Q99952 ZNF807-201ENST00000328088 1707 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 AC004925.1-201ENST00000624256 2706 ntBASIC4.29□□□□□ -1.72
PTPN18Q99952 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN18Q99952 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
PTPN18Q99952 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
PTPN18Q99952 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN18Q99952 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN18Q99952 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN18Q99952 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
PTPN18Q99952 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN18Q99952 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN18Q99952 Y_RNA.80-201ENST00000362996 102 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 Y_RNA.176-201ENST00000363815 109 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 RNU6-61P-201ENST00000365528 109 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 Y_RNA.476-201ENST00000384347 108 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 Y_RNA.557-201ENST00000384680 107 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 SNORA48.5-201ENST00000391143 135 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AL136372.1-201ENST00000403060 228 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AC099677.1-201ENST00000420575 175 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN18Q99952 USP9YP16-201ENST00000430287 407 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 SNAP23P1-201ENST00000433229 246 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 USP9YP23-201ENST00000455085 407 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 HMGB3P30-201ENST00000457863 606 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC004801.2-202ENST00000463559 283 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC106872.2-201ENST00000494303 480 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC097473.1-201ENST00000508142 408 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 RNU2-27P-201ENST00000516185 142 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 RNU6-273P-201ENST00000516937 96 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AP000763.2-201ENST00000540641 163 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN18Q99952 MTCO3P23-201ENST00000561363 289 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AC138761.3-201ENST00000579993 334 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN18Q99952 SNRPGP15-201ENST00000600149 222 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AL138726.1-201ENST00000614873 333 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 PLCE1P1-201ENST00000622094 305 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AC025034.2-201ENST00000623264 286 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 AL136313.1-201ENST00000624804 202 ntBASIC4.28□□□□□ -1.72
PTPN18Q99952 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
PTPN18Q99952 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTPN18Q99952 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN18Q99952 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN18Q99952 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms