Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX3Q99909 AC090096.1-201ENST00000489168 390 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RPL39P36-201ENST00000490784 156 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RPS27AP10-201ENST00000496103 208 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.63□□□□□ -1.99
SSX3Q99909 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 RN7SKP43-201ENST00000516173 320 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RNU6-677P-201ENST00000516914 101 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX3Q99909 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.63□□□□□ -1.99
SSX3Q99909 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX3Q99909 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.63□□□□□ -1.99
SSX3Q99909 AC023043.3-201ENST00000593113 385 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 BNIP3P9-201ENST00000603714 553 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 SEPT7P9-203ENST00000604116 343 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 YPEL5P2-201ENST00000605553 359 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SSX3Q99909 AL451064.1-201ENST00000607718 471 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 AP001506.1-201ENST00000615444 211 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 MIR8057-201ENST00000620957 69 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSX3Q99909 AC110994.2-201ENST00000635481 492 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 MTND5P42-201ENST00000637720 498 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 ELL2P3-201ENST00000457883 1602 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSX3Q99909 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX3Q99909 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX3Q99909 SNORA20.2-201ENST00000383922 131 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 RPS3AP36-201ENST00000398190 775 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 RN7SKP142-201ENST00000411236 328 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AL592045.1-201ENST00000429867 352 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX3Q99909 ATP5C1P1-201ENST00000441945 895 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 MTND2P4-201ENST00000445034 1004 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC009961.3-201ENST00000449832 765 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC093899.1-201ENST00000457984 376 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 SNORD42A-201ENST00000459584 64 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC109925.1-201ENST00000478069 331 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX3Q99909 RN7SL504P-201ENST00000494496 287 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC098591.2-201ENST00000510152 315 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 RNA5SP76-201ENST00000516277 87 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 Y_RNA.688-201ENST00000516565 95 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 RPL21P12-201ENST00000559810 515 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC012493.2-201ENST00000595083 291 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 AL591516.1-201ENST00000611326 274 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 DUSP12P1-201ENST00000612874 516 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AL158063.1-201ENST00000615349 536 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX3Q99909 PISRT1-201ENST00000626175 531 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX3Q99909 AC135776.4-201ENST00000624300 1904 ntBASIC2.62□□□□□ -1.99
SSX3Q99909 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSX3Q99909 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSX3Q99909 RNU1-70P-201ENST00000362618 164 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 RNU1-73P-201ENST00000383971 164 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 RNU6-39P-201ENST00000384344 107 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 RNU6-750P-201ENST00000390946 107 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX3Q99909 NDUFS5P4-201ENST00000412983 318 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 BPY2DP-201ENST00000422208 265 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AL591212.2-201ENST00000433923 257 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AC104850.1-201ENST00000435940 476 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 CST9LP2-201ENST00000437612 320 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 RPS24P1-201ENST00000438550 371 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX3Q99909 AL022238.1-201ENST00000442557 355 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX3Q99909 RPL37P4-201ENST00000448908 268 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AC007182.2-201ENST00000489251 402 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX3Q99909 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX3Q99909 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX3Q99909 RNU1-103P-201ENST00000516502 125 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 Vault.3-201ENST00000516676 95 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 Y_RNA.695-201ENST00000516715 107 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AC022616.3-201ENST00000523940 148 ntBASIC2.61□□□□□ -1.99
SSX3Q99909 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX3Q99909 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX3Q99909 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX3Q99909 H3F3AP1-201ENST00000559984 334 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms