Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPB3Q92617 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NPIPB3Q92617 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 RNA5SP447-201ENST00000363749 119 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RNU1-132P-201ENST00000364300 164 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RNVU1-6-201ENST00000364688 164 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 MIR1251-201ENST00000408552 70 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RNU4-25P-201ENST00000410569 230 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC011933.1-201ENST00000413334 321 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 PGBD4P6-201ENST00000421501 610 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 SNAP23P1-201ENST00000433229 246 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RPL32P28-201ENST00000443577 397 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 MRPS31P2-201ENST00000451581 518 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC010099.1-201ENST00000455434 375 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 RPS27AP10-201ENST00000496103 208 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC008526.1-201ENST00000509149 338 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RPL39P5-202ENST00000512505 151 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RNU6-566P-201ENST00000516790 107 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 RNA5SP454-201ENST00000517231 127 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 CYCSP39-201ENST00000565821 309 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC025627.2-201ENST00000576220 160 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC138761.3-201ENST00000579993 334 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC100830.2-201ENST00000581636 240 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 MIR4715-201ENST00000584117 79 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 AL161729.3-201ENST00000603533 673 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AP000787.2-201ENST00000604432 568 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 Mico1.1-201ENST00000611698 204 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 MIR7703-201ENST00000620784 77 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 AL359697.1-201ENST00000624879 587 ntBASIC3.19□□□□□ -1.9
NPIPB3Q92617 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
NPIPB3Q92617 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPB3Q92617 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC012618.3-205ENST00000637896 1496 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC138393.1-203ENST00000327086 343 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 RNU6-562P-201ENST00000362731 107 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 Y_RNA.61-201ENST00000362835 102 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 SNORD116-11-201ENST00000383882 92 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 RNU6-398P-201ENST00000384143 109 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AL096701.2-201ENST00000416920 238 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 COX6B1P7-201ENST00000430845 235 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AL358472.1-201ENST00000431295 329 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC233279.1-201ENST00000455300 423 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 RNA5SP246-201ENST00000458909 119 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPB3Q92617 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC026726.1-201ENST00000512859 601 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 Y_RNA.682-201ENST00000516457 100 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 COPS8P3-201ENST00000526024 482 ntBASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.18□□□□□ -1.9
NPIPB3Q92617 AC026371.1-201ENST00000551867 419 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms