Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC110794.1-201ENST00000505816 425 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.38□□□□□ -1.71
RTF1Q92541 AC098591.2-201ENST00000510152 315 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AC108078.2-201ENST00000510750 236 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 RNU7-30P-201ENST00000516835 62 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 RN7SKP57-201ENST00000517248 293 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 BTF3P12-201ENST00000519620 469 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.38□□□□□ -1.71
RTF1Q92541 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.38□□□□□ -1.71
RTF1Q92541 MIR5680-201ENST00000577577 84 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 XIAPP1-201ENST00000603162 600 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AC004696.1-201ENST00000614345 607 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 AL353748.2-201ENST00000622148 471 ntBASIC4.38□□□□□ -1.71
RTF1Q92541 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTF1Q92541 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.38□□□□□ -1.71
RTF1Q92541 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTF1Q92541 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.37□□□□□ -1.71
RTF1Q92541 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTF1Q92541 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTF1Q92541 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTF1Q92541 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RTF1Q92541 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTF1Q92541 U3.12-201ENST00000364498 214 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 SNORA51.2-201ENST00000364595 132 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 SMIM11P1-201ENST00000369586 178 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 RNU6-946P-201ENST00000383878 107 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 SNORA32.2-201ENST00000384049 122 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 Y_RNA.615-201ENST00000410769 117 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 RNU4-46P-201ENST00000410818 138 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.37□□□□□ -1.71
RTF1Q92541 AC126124.2-201ENST00000413542 321 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.37□□□□□ -1.71
RTF1Q92541 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.37□□□□□ -1.71
RTF1Q92541 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTF1Q92541 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.37□□□□□ -1.71
RTF1Q92541 snoU13.24-201ENST00000458998 104 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.37□□□□□ -1.71
RTF1Q92541 RPL23AP55-201ENST00000498163 452 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 Y_RNA.665-201ENST00000516177 98 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 Y_RNA.675-201ENST00000516389 149 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.37□□□□□ -1.71
RTF1Q92541 AC105029.1-201ENST00000520250 669 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.37□□□□□ -1.71
RTF1Q92541 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
RTF1Q92541 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.37□□□□□ -1.71
RTF1Q92541 SNORD84-203ENST00000584275 78 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 AC174048.1-201ENST00000603389 144 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 AC021646.1-201ENST00000605469 484 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 YPEL5P2-201ENST00000605553 359 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 uc_338.34-201ENST00000617467 174 ntBASIC4.37□□□□□ -1.71
RTF1Q92541 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RTF1Q92541 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.37□□□□□ -1.71
RTF1Q92541 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RTF1Q92541 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RTF1Q92541 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.37□□□□□ -1.71
RTF1Q92541 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTF1Q92541 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTF1Q92541 RNU6-522P-201ENST00000364497 107 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.36□□□□□ -1.71
RTF1Q92541 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RTF1Q92541 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTF1Q92541 RPL7P46-201ENST00000425129 740 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC093106.2-201ENST00000428212 385 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
RTF1Q92541 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.36□□□□□ -1.71
RTF1Q92541 RPL9P32-201ENST00000464118 620 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC104806.1-201ENST00000508720 308 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.36□□□□□ -1.71
RTF1Q92541 NDUFB4P9-201ENST00000511646 388 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC112206.3-201ENST00000514578 389 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 SNORA19.2-201ENST00000516013 114 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 RN7SKP256-201ENST00000517201 314 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC107934.2-201ENST00000518653 310 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 MTND4P7-201ENST00000523876 130 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AL137161.1-201ENST00000532231 390 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.36□□□□□ -1.71
RTF1Q92541 AC005476.1-201ENST00000554427 397 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.36□□□□□ -1.71
RTF1Q92541 OR4H12P-201ENST00000556269 907 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.36□□□□□ -1.71
RTF1Q92541 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.36□□□□□ -1.71
RTF1Q92541 MIR4795-201ENST00000584182 89 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC044792.1-201ENST00000593294 196 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 HMGN2P28-201ENST00000606102 262 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC007998.5-201ENST00000622938 237 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 AC005858.4-201ENST00000623191 700 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 MTND1P37-201ENST00000636562 264 ntBASIC4.36□□□□□ -1.71
RTF1Q92541 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTF1Q92541 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.36□□□□□ -1.71
RTF1Q92541 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTF1Q92541 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTF1Q92541 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RTF1Q92541 TPTE2P4-201ENST00000258589 1605 ntBASIC4.35□□□□□ -1.71
RTF1Q92541 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTF1Q92541 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTF1Q92541 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
RTF1Q92541 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms