Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4□□□□□ -1.77
RNF169Q8NCN4 AC093012.1-202ENST00000549403 582 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 FRG2DP-202ENST00000566967 323 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 AL137849.1-201ENST00000604767 169 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 Z82243.1-201ENST00000609432 473 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 AC091953.5-201ENST00000622919 233 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 AC134503.1-201ENST00000633048 54 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 IPO8P1-201ENST00000455509 3109 ntBASIC4□□□□□ -1.77
RNF169Q8NCN4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 MIR423-201ENST00000362201 94 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RNA5SP50-201ENST00000363731 107 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RNU6-43P-201ENST00000384302 107 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 SNORD116-29-201ENST00000384516 83 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 MIR490-201ENST00000384865 128 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AL583834.1-201ENST00000406943 343 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RN7SKP158-201ENST00000410453 326 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AL159987.2-201ENST00000432754 307 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC004866.2-201ENST00000438285 481 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RPS15AP27-201ENST00000449183 343 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC069499.1-201ENST00000489433 509 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RBBP4P6-201ENST00000508098 202 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RNU6-1088P-201ENST00000516850 104 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RNU4-60P-201ENST00000517239 135 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AF038458.1-201ENST00000588406 262 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC067852.3-201ENST00000589177 561 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC174048.1-201ENST00000603389 144 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 IGHV3-29-201ENST00000604817 344 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AC090971.5-201ENST00000621102 293 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AL589994.2-201ENST00000621124 579 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 AL353748.2-201ENST00000622148 471 ntBASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF169Q8NCN4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 RPL7P10-201ENST00000417407 739 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 SSXP9-201ENST00000417503 292 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 MTCO2P27-201ENST00000420740 428 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 SNORD105B-201ENST00000458770 79 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 TRBV12-2-201ENST00000489763 344 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 RNU6-189P-201ENST00000516120 101 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 RNU6-559P-201ENST00000516151 98 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 SNORA70.14-201ENST00000516205 110 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 Y_RNA.718-201ENST00000517110 102 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AP006587.4-201ENST00000526053 529 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 MTCO3P23-201ENST00000561363 289 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AC006116.10-201ENST00000591836 581 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AC092747.3-201ENST00000603769 301 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 DPPA3P3-201ENST00000603842 430 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 APOOP1-201ENST00000604695 592 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AL133215.3-201ENST00000609801 448 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 MIR7975-201ENST00000619350 68 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AC007998.5-201ENST00000622938 237 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AP000553.6-201ENST00000641242 118 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 PRO1804-201ENST00000623780 2050 ntBASIC3.98□□□□□ -1.77
RNF169Q8NCN4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF169Q8NCN4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF169Q8NCN4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF169Q8NCN4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF169Q8NCN4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RNF169Q8NCN4 Y_RNA.128-201ENST00000363391 112 ntBASIC3.97□□□□□ -1.77
RNF169Q8NCN4 RNU6-525P-201ENST00000363685 104 ntBASIC3.97□□□□□ -1.77
RNF169Q8NCN4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF169Q8NCN4 Y_RNA.399-201ENST00000383955 105 ntBASIC3.97□□□□□ -1.77
RNF169Q8NCN4 RNU6-701P-201ENST00000384059 107 ntBASIC3.97□□□□□ -1.77
RNF169Q8NCN4 MIR491-201ENST00000384877 84 ntBASIC3.97□□□□□ -1.77
RNF169Q8NCN4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms