Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC009314.1-201ENST00000603871 304 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 SNORD91B-202ENST00000608459 222 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 AC009318.2-201ENST00000610917 651 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4DQ86TL0 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.24□□□□□ -1.73
ATG4DQ86TL0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 RN7SKP224-201ENST00000364140 325 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 SNORD116-18-201ENST00000383961 92 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 MIR192-201ENST00000384915 110 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.590-201ENST00000410140 107 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 RN7SKP267-201ENST00000410381 285 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 TMSB10P2-201ENST00000416049 131 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC005154.2-201ENST00000438110 379 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AP001324.2-201ENST00000461163 319 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC034236.1-201ENST00000469891 373 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 RN7SL860P-201ENST00000473738 223 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 RPL23AP65-201ENST00000475608 468 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 RPL36AP41-201ENST00000493820 306 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AP006245.1-201ENST00000522549 120 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 CASP1P1-201ENST00000526345 212 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 BDH2P1-201ENST00000602288 736 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.23□□□□□ -1.73
ATG4DQ86TL0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.23□□□□□ -1.73
ATG4DQ86TL0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AC092079.1-201ENST00000558620 1985 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AL590240.1-201ENST00000334118 313 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RNU6-989P-201ENST00000362756 107 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 Y_RNA.286-201ENST00000364813 102 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RNU6-339P-201ENST00000384310 107 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 MIR135A2-201ENST00000384854 100 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 MIR141-201ENST00000384975 95 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 SNORA12.2-201ENST00000391040 156 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 SNORA68.2-201ENST00000391263 128 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RNU2-61P-201ENST00000411069 191 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AC016831.4-201ENST00000438302 307 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 NIP7P2-201ENST00000485801 544 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RPS27AP13-201ENST00000498403 237 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 SNORA31.3-201ENST00000516029 96 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RNU6-1012P-201ENST00000516606 109 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RN7SKP258-201ENST00000517151 304 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 H3F3AP1-201ENST00000559984 334 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 MIR8076-201ENST00000611401 83 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AL450472.3-201ENST00000615578 367 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 MIR6853-201ENST00000619642 74 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 MIR6810-201ENST00000622701 70 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 AL672167.1-203ENST00000641299 2975 ntBASIC4.22□□□□□ -1.73
ATG4DQ86TL0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4DQ86TL0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms