Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHFQ7M4L6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHFQ7M4L6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHFQ7M4L6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHFQ7M4L6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHFQ7M4L6 Y_RNA.86-201ENST00000363020 111 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 SNORA72.1-201ENST00000363485 129 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 Y_RNA.160-201ENST00000363677 92 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU6-867P-201ENST00000364956 107 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU4-66P-201ENST00000365199 138 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU6-741P-201ENST00000383889 107 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU6-1127P-201ENST00000384580 107 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU6-332P-201ENST00000391193 108 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHFQ7M4L6 AL139039.1-201ENST00000401900 692 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU6-373P-201ENST00000411247 98 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNA5SP111-201ENST00000411386 101 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHFQ7M4L6 EEF1A1P40-201ENST00000412883 573 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC126124.2-201ENST00000413542 321 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 RPL23AP82-202ENST00000427528 469 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RPL7P2-201ENST00000427639 268 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AL590383.1-201ENST00000428602 75 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 PIGFP3-201ENST00000441918 722 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 HMGN2P26-201ENST00000463169 339 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 KC877373.1-201ENST00000479066 408 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 MTCO2P30-201ENST00000503662 364 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AP001804.3-201ENST00000525146 880 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 CASP1P1-201ENST00000526345 212 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC078814.3-201ENST00000553036 491 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 RN7SL703P-201ENST00000578485 302 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC093227.2-201ENST00000589357 285 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 BNIP3P10-201ENST00000605360 577 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 AC092794.2-201ENST00000620933 563 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 AP003122.6-201ENST00000623831 495 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
SHFQ7M4L6 MTND4P14-201ENST00000435799 1354 ntBASIC3.11□□□□□ -1.91
SHFQ7M4L6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 Y_RNA.157-201ENST00000363638 102 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHFQ7M4L6 MIR325-201ENST00000385260 98 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 AL356968.1-201ENST00000416622 474 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AL121601.2-201ENST00000438019 707 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 SNORD105B-201ENST00000458770 79 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 SNRPGP3-201ENST00000469405 227 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC012181.1-201ENST00000479895 423 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 RPL21P99-201ENST00000480369 423 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AL160314.1-201ENST00000490836 438 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC009901.1-201ENST00000506703 541 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC025465.4-201ENST00000513422 638 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 RN7SKP13-201ENST00000515933 244 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 MTND4P7-201ENST00000523876 130 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 CENPUP1-201ENST00000526649 1202 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 TRAV28-201ENST00000557548 323 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 BNIP3P9-201ENST00000603714 553 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC107294.1-201ENST00000609524 467 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 MIR378J-201ENST00000611988 109 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.1□□□□□ -1.91
SHFQ7M4L6 Z99571.1-201ENST00000636677 394 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 AC007785.2-201ENST00000598627 1916 ntBASIC3.1□□□□□ -1.91
SHFQ7M4L6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHFQ7M4L6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHFQ7M4L6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHFQ7M4L6 RNU6-522P-201ENST00000364497 107 ntBASIC3.09□□□□□ -1.91
SHFQ7M4L6 SNORA4.3-201ENST00000365564 137 ntBASIC3.09□□□□□ -1.91
SHFQ7M4L6 Z99755.1-201ENST00000414048 380 ntBASIC3.09□□□□□ -1.91
SHFQ7M4L6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.09□□□□□ -1.91
SHFQ7M4L6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms