Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 EI24P1-201ENST00000416584 867 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC005517.2-201ENST00000424673 553 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AL137792.2-201ENST00000443484 235 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC005297.2-201ENST00000450430 606 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 CACYBPP2-201ENST00000453625 678 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AP1S2P1-201ENST00000457344 379 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 PABPC1P3-201ENST00000469174 459 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC084357.1-201ENST00000473404 255 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.23□□□□□ -1.89
USP43Q70EL4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 RNA5SP385-201ENST00000515947 110 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 RNU1-95P-201ENST00000516357 160 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 RNU1-128P-201ENST00000516704 160 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 RNU6-579P-201ENST00000516879 102 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 RNU6-1220P-201ENST00000517126 108 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AC023442.1-201ENST00000531247 422 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.23□□□□□ -1.89
USP43Q70EL4 LSM6P2-201ENST00000552208 177 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.23□□□□□ -1.89
USP43Q70EL4 AL356432.3-201ENST00000568952 465 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
USP43Q70EL4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC005344.1-201ENST00000613391 459 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AL357559.1-201ENST00000622228 274 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 AC009093.8-201ENST00000641769 292 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP43Q70EL4 AC092125.1-201ENST00000562568 1995 ntBASIC3.23□□□□□ -1.89
USP43Q70EL4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
USP43Q70EL4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP43Q70EL4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP43Q70EL4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP43Q70EL4 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC116096.1-201ENST00000566804 2314 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.22□□□□□ -1.89
USP43Q70EL4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP43Q70EL4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
USP43Q70EL4 RNU6-1097P-201ENST00000363586 107 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 Y_RNA.197-201ENST00000364004 102 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 SNORA32.2-201ENST00000384049 122 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 RNU4-70P-201ENST00000384579 139 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 MIR30B-201ENST00000384850 88 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
USP43Q70EL4 AL024474.1-201ENST00000404655 591 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AP000567.1-201ENST00000406413 156 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC096632.1-201ENST00000427395 310 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AL353705.1-201ENST00000433468 480 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.22□□□□□ -1.89
USP43Q70EL4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.22□□□□□ -1.89
USP43Q70EL4 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 CECR9-201ENST00000453421 199 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 MTCO3P10-201ENST00000455912 772 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 HMGN2P26-201ENST00000463169 339 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 MRPS17P3-201ENST00000465453 385 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC087879.1-201ENST00000474343 374 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC005726.1-201ENST00000494679 427 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC016065.2-201ENST00000514530 444 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 RN7SKP256-201ENST00000517201 314 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.22□□□□□ -1.89
USP43Q70EL4 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 SUB1P1-201ENST00000524415 382 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AP000889.2-201ENST00000532684 490 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP43Q70EL4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.22□□□□□ -1.89
USP43Q70EL4 AC026464.5-201ENST00000562497 722 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 HMGB1P6-201ENST00000569046 646 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 MIR4504-201ENST00000577413 92 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 SRGNP1-201ENST00000603392 451 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC010591.1-201ENST00000603941 649 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AL161756.2-201ENST00000604597 246 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC121334.2-201ENST00000605387 271 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 AC080078.3-201ENST00000605407 463 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 HMGB1P24-202ENST00000615653 685 ntBASIC3.22□□□□□ -1.89
USP43Q70EL4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.22□□□□□ -1.89
USP43Q70EL4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
USP43Q70EL4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
USP43Q70EL4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.22□□□□□ -1.89
USP43Q70EL4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP43Q70EL4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
USP43Q70EL4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
USP43Q70EL4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP43Q70EL4 AC130650.2-201ENST00000618736 2403 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 AC110774.1-201ENST00000623567 2018 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP43Q70EL4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.21□□□□□ -1.9
USP43Q70EL4 AL161781.1-201ENST00000354277 403 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 RNA5SP295-201ENST00000362655 121 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 RNU6-223P-201ENST00000362830 107 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 RNU6-1243P-201ENST00000364028 107 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.21□□□□□ -1.9
USP43Q70EL4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms