Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AP002371.1-201ENST00000463604 433 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 RPL31P41-201ENST00000477967 372 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 CYCSP2-201ENST00000558168 301 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 MIR4299-201ENST00000577899 72 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.92□□□□□ -2.26
UBR3Q6ZT12 OR4G2P-201ENST00000328113 903 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 RNA5SP62-201ENST00000363457 110 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 RNU6-198P-201ENST00000384258 104 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 RNU6-220P-201ENST00000390919 107 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 UBE2FP1-201ENST00000416536 447 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AC087588.1-201ENST00000462203 316 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 OR52A4P-202ENST00000481634 799 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AP001330.4-201ENST00000604350 154 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AC009229.3-201ENST00000608056 282 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AL592148.2-201ENST00000612210 372 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 MIR924-201ENST00000638017 53 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
UBR3Q6ZT12 AC007785.2-201ENST00000598627 1916 ntBASIC0.91□□□□□ -2.26
UBR3Q6ZT12 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 snoU109.1-201ENST00000459339 135 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 KLF3P2-201ENST00000465138 268 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC107626.1-201ENST00000471084 183 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC093770.1-201ENST00000511559 571 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC090666.1-201ENST00000578241 445 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC106900.2-201ENST00000604994 317 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 AC093838.1-201ENST00000613014 469 ntBASIC0.9□□□□□ -2.26
UBR3Q6ZT12 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.9□□□□□ -2.26
UBR3Q6ZT12 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
UBR3Q6ZT12 Y_RNA.178-201ENST00000363832 102 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 MIR508-201ENST00000384857 115 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 MIR493-201ENST00000385254 89 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 RPL23AP6-201ENST00000446637 472 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.9□□□□□ -2.27
UBR3Q6ZT12 SNORA48.11-201ENST00000517015 89 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.9□□□□□ -2.27
UBR3Q6ZT12 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.9□□□□□ -2.27
UBR3Q6ZT12 AC005498.1-201ENST00000592125 465 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 AC103710.4-201ENST00000609301 899 ntBASIC0.9□□□□□ -2.27
UBR3Q6ZT12 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.9□□□□□ -2.27
UBR3Q6ZT12 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 Z80107.1-201ENST00000436830 412 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 RPS15AP27-201ENST00000449183 343 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 AC008834.1-201ENST00000511612 175 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 SULT1C2P1-202ENST00000562418 459 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 MIR8087-201ENST00000612745 78 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 AL773524.1-201ENST00000614065 229 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 AC022513.1-201ENST00000624512 117 ntBASIC0.89□□□□□ -2.27
UBR3Q6ZT12 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBR3Q6ZT12 RNU6-16P-201ENST00000384385 107 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 RNU6-1235P-201ENST00000384559 107 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 RN7SKP158-201ENST00000410453 326 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AL358176.2-201ENST00000425769 204 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC012497.1-201ENST00000429392 575 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC016691.1-201ENST00000441321 413 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AL359385.1-201ENST00000456509 365 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 RNU6-498P-201ENST00000459468 107 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC084033.1-201ENST00000550830 633 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 MIR7515-201ENST00000637837 67 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 RNU6-837P-201ENST00000391056 108 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 RNU6-1328P-201ENST00000410938 106 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC096920.1-201ENST00000423991 241 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 EIF4EP4-201ENST00000424916 578 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 Z82190.1-201ENST00000454534 490 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 BX248409.1-201ENST00000455497 255 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 OR2A41P-201ENST00000473586 105 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 FAM206BP-201ENST00000510179 541 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC004812.1-201ENST00000540773 146 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AC073111.2-201ENST00000605657 1075 ntBASIC0.88□□□□□ -2.27
UBR3Q6ZT12 AL360181.4-201ENST00000621752 134 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms