Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC011352.1-201ENST00000512300 793 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AL512310.1-201ENST00000548639 172 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC106900.2-201ENST00000604994 317 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC007619.2-201ENST00000605743 379 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AF250324.2-201ENST00000608299 610 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AL365204.3-201ENST00000612448 685 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC093648.1-201ENST00000623546 606 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.59□□□□□ -1.84
SYNE3Q6ZMZ3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC073346.2-201ENST00000624724 2058 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-188P-201ENST00000364207 107 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 MIR454-201ENST00000390180 115 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 CIR1P3-201ENST00000405137 479 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AL354719.1-201ENST00000406535 843 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 CBWD4P-201ENST00000445695 655 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 UQCRHP3-201ENST00000451503 251 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 RNU1-61P-201ENST00000516107 151 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-390P-201ENST00000516259 103 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 HMGB1P33-201ENST00000563485 527 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 HMGB1P6-201ENST00000569046 646 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 MIR5195-201ENST00000583555 115 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC107304.1-201ENST00000604229 296 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AP001596.2-201ENST00000608410 312 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC034102.8-201ENST00000615146 484 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 AC026585.1-201ENST00000619582 524 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SYNE3Q6ZMZ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AL139276.1-201ENST00000311910 1001 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 RNU4-48P-201ENST00000365559 182 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-946P-201ENST00000383878 107 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-701P-201ENST00000384059 107 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 MTND5P7-201ENST00000413558 1798 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 EIF1P1-201ENST00000421436 341 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 USP9YP18-201ENST00000425912 695 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 DDX3P2-201ENST00000446138 111 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 MRPS17P3-201ENST00000465453 385 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC006445.1-201ENST00000491925 405 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 RPL30P5-201ENST00000494923 336 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC116562.3-201ENST00000506136 177 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC117522.1-201ENST00000509821 380 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC098591.2-201ENST00000510152 315 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 Y_RNA.693-201ENST00000516641 110 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC068587.5-201ENST00000528506 175 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC027514.1-201ENST00000588561 1603 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC007363.1-201ENST00000604736 620 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 AC007998.5-201ENST00000622938 237 ntBASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SYNE3Q6ZMZ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 API5P2-201ENST00000397055 1498 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 SNORA71.1-201ENST00000364523 117 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-741P-201ENST00000383889 107 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 MIR493-201ENST00000385254 89 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 RNU2-33P-201ENST00000410344 192 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 SDCBPP3-201ENST00000419629 891 ntBASIC3.56□□□□□ -1.84
SYNE3Q6ZMZ3 UBE2V1P8-201ENST00000437166 265 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms