Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 MIR4801-201ENST00000582704 82 ntBASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.75□□□□□ -1.81
PPP4R4Q6NUP7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RPL30P16-201ENST00000419341 429 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AL358472.1-201ENST00000431295 329 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RPS15AP5-201ENST00000436276 388 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 SCARNA18-201ENST00000459004 134 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RPL23AP14-201ENST00000468281 468 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RN7SL604P-201ENST00000492589 296 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RPL29P14-201ENST00000495837 428 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RPL38P4-201ENST00000502376 214 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RAC1P5-201ENST00000512182 576 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 SNORD60.2-201ENST00000516883 86 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 MTCO3P23-201ENST00000561363 289 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AC006504.1-201ENST00000562493 3666 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 MIR548AC-201ENST00000585049 88 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 RNU4-89P-201ENST00000607443 133 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 DISC2.1-201ENST00000612827 205 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 uc_338.34-201ENST00000617467 174 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AC112484.5-201ENST00000624189 228 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AP003400.5-201ENST00000624827 617 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 AC068724.3-201ENST00000625906 87 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 SNORA50A-202ENST00000629536 136 ntBASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PPP4R4Q6NUP7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RNU6-522P-201ENST00000364497 107 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RNA5SP479-201ENST00000364858 117 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RNU6-658P-201ENST00000384606 106 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 SNORA40C-201ENST00000391285 128 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RPL21P65-201ENST00000406094 466 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AL606923.1-201ENST00000406616 190 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC002075.2-201ENST00000425207 252 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC005300.1-201ENST00000428401 373 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 SRIP2-201ENST00000428470 166 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC083863.1-201ENST00000438811 231 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RPL23AP11-201ENST00000475260 469 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC026402.1-201ENST00000513642 170 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RNU2-69P-201ENST00000516061 100 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 RNU6-1178P-201ENST00000516674 107 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AC025281.1-201ENST00000567026 265 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AL020991.1-201ENST00000612314 373 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AL591424.2-201ENST00000617023 128 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 MIR3662-201ENST00000637030 95 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 OR4G1P-203ENST00000641984 1631 ntBASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PPP4R4Q6NUP7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AL079305.1-201ENST00000623159 3008 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RNA5SP130-201ENST00000364431 114 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 SNORD70.1-201ENST00000391007 85 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 MIR1193-201ENST00000408109 78 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RNU4-6P-201ENST00000410804 122 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RN7SKP263-201ENST00000411194 309 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.72□□□□□ -1.81
PPP4R4Q6NUP7 AC009414.1-201ENST00000427200 443 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms