Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.23□□□□□ -2.21
CCDC18Q5T9S5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC18Q5T9S5 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
CCDC18Q5T9S5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC18Q5T9S5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 RNU6-17P-201ENST00000384245 107 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 RNU6-18P-201ENST00000384527 107 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 RN7SKP158-201ENST00000410453 326 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 AL691517.1-201ENST00000440833 1235 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 NEFMP1-201ENST00000443423 1006 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 AC025588.2-201ENST00000604851 466 ntBASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC18Q5T9S5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 UBE2V1P9-201ENST00000414760 368 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 UBE2FP1-201ENST00000416536 447 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AL158823.1-201ENST00000418441 478 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 DYNLL1P5-201ENST00000467158 270 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AC021382.1-201ENST00000483523 359 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AC105245.1-201ENST00000581934 244 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AL133370.2-201ENST00000619934 439 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 AC027309.3-201ENST00000623419 351 ntBASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CCDC18Q5T9S5 HAUS6P2-201ENST00000433254 2404 ntBASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 CBX3P3-201ENST00000508108 532 ntBASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 AP002791.1-201ENST00000623291 381 ntBASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC18Q5T9S5 DEFB108F-201ENST00000344638 222 ntBASIC1.19□□□□□ -2.22
CCDC18Q5T9S5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC18Q5T9S5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC18Q5T9S5 SFR1P2-201ENST00000421841 730 ntBASIC1.19□□□□□ -2.22
CCDC18Q5T9S5 AC234064.1-201ENST00000436312 247 ntBASIC1.19□□□□□ -2.22
CCDC18Q5T9S5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC18Q5T9S5 RNA5SP258-201ENST00000362750 119 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 AC244636.1-201ENST00000421152 228 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 RMST_5.1-201ENST00000618704 126 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 Y_RNA.68-201ENST00000362881 102 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 SNORA81-201ENST00000408493 178 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 RN7SKP61-201ENST00000410642 295 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 OR52A4P-202ENST00000481634 799 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 AL355877.2-201ENST00000603670 358 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 AC012213.4-201ENST00000606457 354 ntBASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC18Q5T9S5 AL513185.3-201ENST00000433335 1300 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 RNA5SP257-201ENST00000363023 116 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 RNU6-1249P-201ENST00000363237 111 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 Y_RNA.115-201ENST00000363272 98 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 MT-TC-201ENST00000387405 66 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AC093106.2-201ENST00000428212 385 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AL714022.1-201ENST00000439897 151 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 SUMO2P2-201ENST00000456482 255 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AC116337.2-201ENST00000477662 156 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 RNU6-351P-201ENST00000516097 100 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 Y_RNA.681-201ENST00000516445 113 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AL592148.2-201ENST00000612210 372 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 MIR6513-201ENST00000621188 64 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AP006248.3-201ENST00000623580 594 ntBASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC18Q5T9S5 RNA5SP56-201ENST00000410277 118 ntBASIC1.16□□□□□ -2.22
CCDC18Q5T9S5 RPS15AP38-201ENST00000413110 372 ntBASIC1.16□□□□□ -2.22
CCDC18Q5T9S5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC18Q5T9S5 AC092989.1-201ENST00000481235 277 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms