Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 SNORA70.14-201ENST00000516205 110 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AC103705.1-201ENST00000619013 241 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AC006111.3-201ENST00000622137 383 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 MTND4P35-201ENST00000604257 1375 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 UBE3AP2-201ENST00000429033 2259 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CCDC144BQ3MJ40 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AP004289.2-201ENST00000444413 1457 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 RNA5SP97-201ENST00000365006 84 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.378-201ENST00000365652 113 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.530-201ENST00000384587 101 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 MIR578-201ENST00000384828 96 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.615-201ENST00000410769 117 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 BX682237.1-201ENST00000415016 335 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 BRK1P2-201ENST00000442875 223 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 MTND5P20-201ENST00000448677 143 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 HMGB3P8-201ENST00000449709 577 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AL590639.1-201ENST00000456484 337 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AC026801.1-201ENST00000497178 464 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 PSMA3P-201ENST00000555485 635 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AC012119.1-201ENST00000603184 222 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AC092747.3-201ENST00000603769 301 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 AC012468.1-201ENST00000604888 430 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 IPO8P1-201ENST00000455509 3109 ntBASIC4.46□□□□□ -1.7
CCDC144BQ3MJ40 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-522P-201ENST00000364497 107 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 U3.12-201ENST00000364498 214 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.279-201ENST00000364763 95 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.303-201ENST00000364998 94 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.373-201ENST00000365600 103 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-1179P-201ENST00000384667 107 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 EIF4E2P1-201ENST00000393781 255 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 NDUFB1P2-201ENST00000449477 176 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 CYCSP27-201ENST00000527643 293 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC023050.3-201ENST00000541142 333 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC110741.2-201ENST00000605278 268 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC019176.2-201ENST00000611579 315 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC005344.1-201ENST00000613391 459 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC012314.7-201ENST00000619693 93 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC092794.2-201ENST00000620933 563 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 AC073308.1-201ENST00000623696 305 ntBASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC144BQ3MJ40 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 FRG1CP-201ENST00000358464 769 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RNA5SP219-201ENST00000390940 113 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AL353621.1-201ENST00000418219 243 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 USP9YP20-201ENST00000419224 558 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 HMGN2P30-201ENST00000423237 256 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RPL23AP82-202ENST00000427528 469 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 HMGN2P20-201ENST00000437531 273 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AL360271.2-201ENST00000447710 161 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 ANP32BP2-201ENST00000454525 545 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RPL12P25-201ENST00000455592 494 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC022493.1-201ENST00000492984 337 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 MTCO2P30-201ENST00000503662 364 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC114786.4-201ENST00000508771 728 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC046134.1-201ENST00000514454 666 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AC112206.3-201ENST00000514578 389 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.665-201ENST00000516177 98 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-1038P-201ENST00000516516 104 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 Y_RNA.702-201ENST00000516843 96 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 SCARNA14-201ENST00000516903 136 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-1314P-201ENST00000517139 104 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 RPL7P20-201ENST00000520308 745 ntBASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC144BQ3MJ40 AL118558.2-201ENST00000556294 238 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms