Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MIR1244-2-201ENST00000636449 85 ntBASIC4.24□□□□□ -1.73
YBX1P67809 MIR1244-4-202ENST00000636813 85 ntBASIC4.24□□□□□ -1.73
YBX1P67809 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
YBX1P67809 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
YBX1P67809 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
YBX1P67809 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
YBX1P67809 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
YBX1P67809 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.24□□□□□ -1.73
YBX1P67809 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.23□□□□□ -1.73
YBX1P67809 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
YBX1P67809 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 MIR153-1-201ENST00000384914 90 ntBASIC4.23□□□□□ -1.73
YBX1P67809 RNU6-817P-201ENST00000391083 104 ntBASIC4.23□□□□□ -1.73
YBX1P67809 RNA5SP56-201ENST00000410277 118 ntBASIC4.23□□□□□ -1.73
YBX1P67809 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
YBX1P67809 ELOCP18-201ENST00000434209 337 ntBASIC4.23□□□□□ -1.73
YBX1P67809 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.23□□□□□ -1.73
YBX1P67809 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
YBX1P67809 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.23□□□□□ -1.73
YBX1P67809 RPL23AP24-201ENST00000458203 385 ntBASIC4.23□□□□□ -1.73
YBX1P67809 RPL35AP15-201ENST00000468042 339 ntBASIC4.23□□□□□ -1.73
YBX1P67809 TRBVB-201ENST00000477100 408 ntBASIC4.23□□□□□ -1.73
YBX1P67809 NIP7P2-201ENST00000485801 544 ntBASIC4.23□□□□□ -1.73
YBX1P67809 RPS27AP13-201ENST00000498403 237 ntBASIC4.23□□□□□ -1.73
YBX1P67809 AC015795.1-201ENST00000513669 327 ntBASIC4.23□□□□□ -1.73
YBX1P67809 RPL23AP97-201ENST00000568955 471 ntBASIC4.23□□□□□ -1.73
YBX1P67809 RPL23AP87-202ENST00000573039 466 ntBASIC4.23□□□□□ -1.73
YBX1P67809 AC012433.1-201ENST00000588916 398 ntBASIC4.23□□□□□ -1.73
YBX1P67809 AC079587.1-201ENST00000603846 277 ntBASIC4.23□□□□□ -1.73
YBX1P67809 AC005344.1-201ENST00000613391 459 ntBASIC4.23□□□□□ -1.73
YBX1P67809 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 AL159153.1-201ENST00000619688 317 ntBASIC4.23□□□□□ -1.73
YBX1P67809 SNORD39.4-201ENST00000620099 78 ntBASIC4.23□□□□□ -1.73
YBX1P67809 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
YBX1P67809 AC034229.5-201ENST00000624258 185 ntBASIC4.23□□□□□ -1.73
YBX1P67809 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.23□□□□□ -1.73
YBX1P67809 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
YBX1P67809 AC125257.1-201ENST00000560400 2930 ntBASIC4.23□□□□□ -1.73
YBX1P67809 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
YBX1P67809 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
YBX1P67809 AC027290.2-201ENST00000623210 18662 ntBASIC4.23□□□□□ -1.73
YBX1P67809 NEAT1-202ENST00000501122 22743 ntBASIC4.23□□□□□ -1.73
YBX1P67809 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
YBX1P67809 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
YBX1P67809 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 AL157777.2-201ENST00000258070 137 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RNA5SP307-201ENST00000362863 116 ntBASIC4.22□□□□□ -1.73
YBX1P67809 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.22□□□□□ -1.73
YBX1P67809 MIR3065-201ENST00000390137 79 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RAC1P3-201ENST00000416129 580 ntBASIC4.22□□□□□ -1.73
YBX1P67809 SSXP9-201ENST00000417503 292 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AC006946.1-201ENST00000429106 328 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RPS29P17-201ENST00000430795 166 ntBASIC4.22□□□□□ -1.73
YBX1P67809 HMGB1P27-201ENST00000431429 603 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 AC090774.1-201ENST00000435925 246 ntBASIC4.22□□□□□ -1.73
YBX1P67809 FCF1P4-201ENST00000448326 183 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RPS11P1-201ENST00000451072 473 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RNA5SP497-201ENST00000516081 97 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RN7SKP258-201ENST00000517151 304 ntBASIC4.22□□□□□ -1.73
YBX1P67809 RNU6-840P-201ENST00000517275 65 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AP003733.2-201ENST00000529409 171 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.22□□□□□ -1.73
YBX1P67809 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.22□□□□□ -1.73
YBX1P67809 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 AC012669.1-201ENST00000603209 283 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AL390123.1-201ENST00000603216 237 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AL356218.2-201ENST00000605264 187 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AC015813.4-201ENST00000610469 179 ntBASIC4.22□□□□□ -1.73
YBX1P67809 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AC007546.2-201ENST00000623996 360 ntBASIC4.22□□□□□ -1.73
YBX1P67809 AL512643.1-201ENST00000635735 524 ntBASIC4.22□□□□□ -1.73
YBX1P67809 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
YBX1P67809 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
YBX1P67809 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
YBX1P67809 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.22□□□□□ -1.73
YBX1P67809 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
YBX1P67809 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
YBX1P67809 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
YBX1P67809 ZNF962P-201ENST00000443465 3140 ntBASIC4.21□□□□□ -1.73
YBX1P67809 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms