Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CLDN12P56749 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 AP005901.5-201ENST00000545779 1796 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLDN12P56749 RNU6-1167P-201ENST00000363227 94 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 Y_RNA.111-201ENST00000363248 100 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CLDN12P56749 AL356421.1-201ENST00000403255 413 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 AL033519.2-201ENST00000403958 392 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 BTF3P8-201ENST00000414577 526 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 BX119904.4-201ENST00000424402 301 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.63□□□□□ -2.15
CLDN12P56749 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
CLDN12P56749 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.63□□□□□ -2.15
CLDN12P56749 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.63□□□□□ -2.15
CLDN12P56749 RPL23AP41-201ENST00000484754 458 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 HMGB3P17-201ENST00000504195 649 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CLDN12P56749 AC119751.5-201ENST00000514077 770 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.63□□□□□ -2.15
CLDN12P56749 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.63□□□□□ -2.15
CLDN12P56749 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.63□□□□□ -2.15
CLDN12P56749 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.63□□□□□ -2.15
CLDN12P56749 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 AL355297.2-201ENST00000604792 129 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 AC103710.1-201ENST00000610003 901 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CLDN12P56749 AC008759.3-201ENST00000613300 508 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 IGHVIII-44-202ENST00000636235 289 ntBASIC1.63□□□□□ -2.15
CLDN12P56749 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CLDN12P56749 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CLDN12P56749 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLDN12P56749 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 RNU6-234P-201ENST00000365229 104 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 AL356432.1-201ENST00000405809 419 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 MIR1302-8-201ENST00000408342 128 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 AL353621.1-201ENST00000418219 243 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 AC097463.2-201ENST00000421074 142 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.62□□□□□ -2.15
CLDN12P56749 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN12P56749 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 AP001324.2-201ENST00000461163 319 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN12P56749 RNU6-334P-201ENST00000517072 102 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 DEFB130C-202ENST00000530001 230 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 SNRPGP1-201ENST00000553864 222 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.62□□□□□ -2.15
CLDN12P56749 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLDN12P56749 AC090897.2-201ENST00000581715 130 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLDN12P56749 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.62□□□□□ -2.15
CLDN12P56749 BNIP3P23-201ENST00000599655 511 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.62□□□□□ -2.15
CLDN12P56749 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN12P56749 AC091953.2-201ENST00000623979 160 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN12P56749 AC006927.2-201ENST00000639256 389 ntBASIC1.62□□□□□ -2.15
CLDN12P56749 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.62□□□□□ -2.15
CLDN12P56749 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CLDN12P56749 XGY1-201ENST00000381172 446 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 MTCO1P56-201ENST00000401674 224 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 RNU2-2P-201ENST00000410396 191 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.61□□□□□ -2.15
CLDN12P56749 MRPS36P1-201ENST00000421291 307 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 AC096920.1-201ENST00000423991 241 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 ISCA1P1-201ENST00000426679 387 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLDN12P56749 GTF2IP3-201ENST00000433887 494 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 MTCO1P53-201ENST00000441633 699 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 AL161788.1-201ENST00000441805 169 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 UBE2DNL-203ENST00000474922 222 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 CKS1BP2-201ENST00000497342 240 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLDN12P56749 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.61□□□□□ -2.15
CLDN12P56749 SNORA31.23-201ENST00000517219 133 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CLDN12P56749 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 AL121821.2-201ENST00000556081 394 ntBASIC1.61□□□□□ -2.15
CLDN12P56749 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.61□□□□□ -2.15
CLDN12P56749 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.61□□□□□ -2.15
CLDN12P56749 AC243960.4-201ENST00000600532 288 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms