Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SSXP1-201ENST00000453640 473 ntBASIC2.38□□□□□ -2.03
LIM2P55344 AL590639.1-201ENST00000456484 337 ntBASIC2.38□□□□□ -2.03
LIM2P55344 RNU6-953P-201ENST00000459154 107 ntBASIC2.38□□□□□ -2.03
LIM2P55344 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
LIM2P55344 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.38□□□□□ -2.03
LIM2P55344 RN7SKP24-201ENST00000515888 284 ntBASIC2.38□□□□□ -2.03
LIM2P55344 RNU4-29P-201ENST00000515943 174 ntBASIC2.38□□□□□ -2.03
LIM2P55344 RNA5SP320-201ENST00000516263 124 ntBASIC2.38□□□□□ -2.03
LIM2P55344 RNU6-759P-201ENST00000516740 103 ntBASIC2.38□□□□□ -2.03
LIM2P55344 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.38□□□□□ -2.03
LIM2P55344 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.38□□□□□ -2.03
LIM2P55344 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.38□□□□□ -2.03
LIM2P55344 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
LIM2P55344 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.38□□□□□ -2.03
LIM2P55344 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.38□□□□□ -2.03
LIM2P55344 AC020895.1-201ENST00000595362 272 ntBASIC2.38□□□□□ -2.03
LIM2P55344 AC078899.3-201ENST00000599065 212 ntBASIC2.38□□□□□ -2.03
LIM2P55344 AC098826.3-201ENST00000603823 466 ntBASIC2.38□□□□□ -2.03
LIM2P55344 AC105129.3-201ENST00000605455 485 ntBASIC2.38□□□□□ -2.03
LIM2P55344 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.38□□□□□ -2.03
LIM2P55344 AL391813.2-201ENST00000609113 322 ntBASIC2.38□□□□□ -2.03
LIM2P55344 DUSP12P1-201ENST00000612874 516 ntBASIC2.38□□□□□ -2.03
LIM2P55344 AC008498.1-201ENST00000613012 531 ntBASIC2.38□□□□□ -2.03
LIM2P55344 MIR6817-201ENST00000615588 66 ntBASIC2.38□□□□□ -2.03
LIM2P55344 AC120349.3-201ENST00000624377 529 ntBASIC2.38□□□□□ -2.03
LIM2P55344 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.37□□□□□ -2.03
LIM2P55344 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIM2P55344 RNU6-960P-201ENST00000364056 120 ntBASIC2.37□□□□□ -2.03
LIM2P55344 RNU5E-6P-201ENST00000365574 115 ntBASIC2.37□□□□□ -2.03
LIM2P55344 MIR634-201ENST00000385208 97 ntBASIC2.37□□□□□ -2.03
LIM2P55344 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
LIM2P55344 RPS4XP8-201ENST00000402039 771 ntBASIC2.37□□□□□ -2.03
LIM2P55344 MRPL42P2-201ENST00000403169 426 ntBASIC2.37□□□□□ -2.03
LIM2P55344 Y_RNA.598-201ENST00000410480 95 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC098614.2-201ENST00000426040 255 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
LIM2P55344 CETN4P-201ENST00000432407 469 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AL445567.1-201ENST00000439121 144 ntBASIC2.37□□□□□ -2.03
LIM2P55344 RPL21P2-201ENST00000440049 481 ntBASIC2.37□□□□□ -2.03
LIM2P55344 UBE2D3P4-201ENST00000441973 436 ntBASIC2.37□□□□□ -2.03
LIM2P55344 COX6CP12-201ENST00000446748 202 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.37□□□□□ -2.03
LIM2P55344 RPS3P1-201ENST00000456781 192 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.37□□□□□ -2.03
LIM2P55344 AC010486.2-201ENST00000505572 483 ntBASIC2.37□□□□□ -2.03
LIM2P55344 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.37□□□□□ -2.03
LIM2P55344 NDUFB4P2-201ENST00000509515 391 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.37□□□□□ -2.03
LIM2P55344 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.37□□□□□ -2.03
LIM2P55344 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
LIM2P55344 RNU6-1092P-201ENST00000516955 87 ntBASIC2.37□□□□□ -2.03
LIM2P55344 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.37□□□□□ -2.03
LIM2P55344 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
LIM2P55344 NACAP3-201ENST00000552100 481 ntBASIC2.37□□□□□ -2.03
LIM2P55344 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
LIM2P55344 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.37□□□□□ -2.03
LIM2P55344 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
LIM2P55344 MIR3915-201ENST00000578518 97 ntBASIC2.37□□□□□ -2.03
LIM2P55344 MIR3162-201ENST00000581818 82 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.37□□□□□ -2.03
LIM2P55344 AC005498.1-201ENST00000592125 465 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC012065.4-201ENST00000602445 679 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AP001981.2-201ENST00000603241 418 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AL358072.1-201ENST00000604156 575 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC104763.2-201ENST00000604179 382 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AL451064.1-201ENST00000607718 471 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AL365204.3-201ENST00000612448 685 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC027807.2-201ENST00000616099 408 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC068057.2-201ENST00000624047 895 ntBASIC2.37□□□□□ -2.03
LIM2P55344 SCARNA15.3-201ENST00000626315 122 ntBASIC2.37□□□□□ -2.03
LIM2P55344 SCARNA4.1-201ENST00000628597 123 ntBASIC2.37□□□□□ -2.03
LIM2P55344 U2.21-201ENST00000637295 81 ntBASIC2.37□□□□□ -2.03
LIM2P55344 AC099654.13-201ENST00000639774 207 ntBASIC2.37□□□□□ -2.03
LIM2P55344 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
LIM2P55344 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIM2P55344 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LIM2P55344 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIM2P55344 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
LIM2P55344 MIR6073-201ENST00000352083 89 ntBASIC2.36□□□□□ -2.03
LIM2P55344 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
LIM2P55344 RNY4P16-201ENST00000364768 94 ntBASIC2.36□□□□□ -2.03
LIM2P55344 MIR767-201ENST00000390228 109 ntBASIC2.36□□□□□ -2.03
LIM2P55344 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.36□□□□□ -2.03
LIM2P55344 MTCYBP36-201ENST00000404146 440 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AL139397.2-201ENST00000404529 772 ntBASIC2.36□□□□□ -2.03
LIM2P55344 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.36□□□□□ -2.03
LIM2P55344 RNU2-68P-201ENST00000410878 191 ntBASIC2.36□□□□□ -2.03
LIM2P55344 RNU6-193P-201ENST00000410977 107 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.36□□□□□ -2.03
LIM2P55344 MTND2P18-201ENST00000419962 1030 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.36□□□□□ -2.03
LIM2P55344 AL358075.3-201ENST00000426289 226 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AL356583.2-201ENST00000426536 280 ntBASIC2.36□□□□□ -2.03
LIM2P55344 GPM6BP2-201ENST00000432046 144 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC098831.1-201ENST00000440661 216 ntBASIC2.36□□□□□ -2.03
LIM2P55344 NEFMP1-201ENST00000443423 1006 ntBASIC2.36□□□□□ -2.03
LIM2P55344 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.36□□□□□ -2.03
LIM2P55344 DDX3P2-201ENST00000446138 111 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms