Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SCARNA11.3-201ENST00000517276 130 ntBASIC2.69□□□□□ -1.98
SMSP52788 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.69□□□□□ -1.98
SMSP52788 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.69□□□□□ -1.98
SMSP52788 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.69□□□□□ -1.98
SMSP52788 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.69□□□□□ -1.98
SMSP52788 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.69□□□□□ -1.98
SMSP52788 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.69□□□□□ -1.98
SMSP52788 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.69□□□□□ -1.98
SMSP52788 AC012435.1-202ENST00000568772 240 ntBASIC2.69□□□□□ -1.98
SMSP52788 AC103810.1-201ENST00000579873 453 ntBASIC2.69□□□□□ -1.98
SMSP52788 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.69□□□□□ -1.98
SMSP52788 AC104984.5-201ENST00000586878 94 ntBASIC2.69□□□□□ -1.98
SMSP52788 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.69□□□□□ -1.98
SMSP52788 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMSP52788 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SMSP52788 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SMSP52788 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 HSPE1P11-201ENST00000339579 310 ntBASIC2.68□□□□□ -1.98
SMSP52788 RNU1-35P-201ENST00000362782 153 ntBASIC2.68□□□□□ -1.98
SMSP52788 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.68□□□□□ -1.98
SMSP52788 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 AL049545.1-201ENST00000401856 572 ntBASIC2.68□□□□□ -1.98
SMSP52788 MTCYBP36-201ENST00000404146 440 ntBASIC2.68□□□□□ -1.98
SMSP52788 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.68□□□□□ -1.98
SMSP52788 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
SMSP52788 AL139132.1-201ENST00000431587 344 ntBASIC2.68□□□□□ -1.98
SMSP52788 RPL36AP53-201ENST00000432891 316 ntBASIC2.68□□□□□ -1.98
SMSP52788 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.68□□□□□ -1.98
SMSP52788 AL133217.1-201ENST00000450980 425 ntBASIC2.68□□□□□ -1.98
SMSP52788 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
SMSP52788 SNRPFP4-201ENST00000456366 242 ntBASIC2.68□□□□□ -1.98
SMSP52788 AF131216.2-201ENST00000512316 564 ntBASIC2.68□□□□□ -1.98
SMSP52788 MRPS36P2-201ENST00000512569 299 ntBASIC2.68□□□□□ -1.98
SMSP52788 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.68□□□□□ -1.98
SMSP52788 AC135628.1-201ENST00000568867 534 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC138761.3-201ENST00000579993 334 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.68□□□□□ -1.98
SMSP52788 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.68□□□□□ -1.98
SMSP52788 AL161734.1-201ENST00000609720 557 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC027807.2-201ENST00000616099 408 ntBASIC2.68□□□□□ -1.98
SMSP52788 AC006338.1-201ENST00000618453 749 ntBASIC2.68□□□□□ -1.98
SMSP52788 AL603755.1-201ENST00000619504 163 ntBASIC2.68□□□□□ -1.98
SMSP52788 MTND5P42-201ENST00000637720 498 ntBASIC2.68□□□□□ -1.98
SMSP52788 MTND4P4-201ENST00000439033 1366 ntBASIC2.68□□□□□ -1.98
SMSP52788 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMSP52788 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
SMSP52788 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.67□□□□□ -1.98
SMSP52788 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SMSP52788 RNU4-1-201ENST00000363925 141 ntBASIC2.67□□□□□ -1.98
SMSP52788 RNU6-188P-201ENST00000364207 107 ntBASIC2.67□□□□□ -1.98
SMSP52788 SMIM11P1-201ENST00000369586 178 ntBASIC2.67□□□□□ -1.98
SMSP52788 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SMSP52788 FCF1P10-201ENST00000407590 479 ntBASIC2.67□□□□□ -1.98
SMSP52788 RPS12P24-201ENST00000412619 387 ntBASIC2.67□□□□□ -1.98
SMSP52788 AC137499.1-201ENST00000427602 88 ntBASIC2.67□□□□□ -1.98
SMSP52788 MED14P1-201ENST00000430517 648 ntBASIC2.67□□□□□ -1.98
SMSP52788 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
SMSP52788 ART2BP-201ENST00000453501 499 ntBASIC2.67□□□□□ -1.98
SMSP52788 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.67□□□□□ -1.98
SMSP52788 FABP5P5-201ENST00000515537 406 ntBASIC2.67□□□□□ -1.98
SMSP52788 SNORD19.2-201ENST00000516978 73 ntBASIC2.67□□□□□ -1.98
SMSP52788 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.67□□□□□ -1.98
SMSP52788 AP003467.2-201ENST00000520175 319 ntBASIC2.67□□□□□ -1.98
SMSP52788 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.67□□□□□ -1.98
SMSP52788 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.67□□□□□ -1.98
SMSP52788 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.67□□□□□ -1.98
SMSP52788 AC112191.3-201ENST00000604371 277 ntBASIC2.67□□□□□ -1.98
SMSP52788 AC012360.2-201ENST00000609349 391 ntBASIC2.67□□□□□ -1.98
SMSP52788 AC107871.2-201ENST00000612894 502 ntBASIC2.67□□□□□ -1.98
SMSP52788 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.67□□□□□ -1.98
SMSP52788 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.67□□□□□ -1.98
SMSP52788 IGHVIII-44-202ENST00000636235 289 ntBASIC2.67□□□□□ -1.98
SMSP52788 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.67□□□□□ -1.98
SMSP52788 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.67□□□□□ -1.98
SMSP52788 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SMSP52788 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SMSP52788 NACAP2-201ENST00000318548 624 ntBASIC2.66□□□□□ -1.98
SMSP52788 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.66□□□□□ -1.98
SMSP52788 Y_RNA.560-201ENST00000384689 102 ntBASIC2.66□□□□□ -1.98
SMSP52788 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SMSP52788 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.66□□□□□ -1.98
SMSP52788 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.66□□□□□ -1.98
SMSP52788 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.66□□□□□ -1.98
SMSP52788 AC092447.3-201ENST00000426027 686 ntBASIC2.66□□□□□ -1.98
SMSP52788 AC063976.3-201ENST00000426849 329 ntBASIC2.66□□□□□ -1.98
SMSP52788 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.66□□□□□ -1.98
SMSP52788 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.66□□□□□ -1.98
SMSP52788 AL513043.1-201ENST00000439124 535 ntBASIC2.66□□□□□ -1.98
SMSP52788 RPS15AP7-201ENST00000439294 405 ntBASIC2.66□□□□□ -1.98
SMSP52788 MTND1P30-201ENST00000441241 901 ntBASIC2.66□□□□□ -1.98
SMSP52788 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.66□□□□□ -1.98
SMSP52788 BRK1P2-201ENST00000442875 223 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms