Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.75□□□□□ -1.97
VCLP18206 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.75□□□□□ -1.97
VCLP18206 AC103810.1-201ENST00000579873 453 ntBASIC2.75□□□□□ -1.97
VCLP18206 ZNF861P-201ENST00000588126 639 ntBASIC2.75□□□□□ -1.97
VCLP18206 AC007619.2-201ENST00000605743 379 ntBASIC2.75□□□□□ -1.97
VCLP18206 AL355816.2-201ENST00000610049 647 ntBASIC2.75□□□□□ -1.97
VCLP18206 AC009878.1-201ENST00000621819 340 ntBASIC2.75□□□□□ -1.97
VCLP18206 AF246928.1-201ENST00000623768 87 ntBASIC2.75□□□□□ -1.97
VCLP18206 SCARNA15.3-201ENST00000626315 122 ntBASIC2.75□□□□□ -1.97
VCLP18206 SCARNA4.1-201ENST00000628597 123 ntBASIC2.75□□□□□ -1.97
VCLP18206 MIR3199-2-201ENST00000636243 86 ntBASIC2.75□□□□□ -1.97
VCLP18206 U2.21-201ENST00000637295 81 ntBASIC2.75□□□□□ -1.97
VCLP18206 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
VCLP18206 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.74□□□□□ -1.97
VCLP18206 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VCLP18206 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.74□□□□□ -1.97
VCLP18206 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCLP18206 RNU6-511P-201ENST00000363496 107 ntBASIC2.74□□□□□ -1.97
VCLP18206 RNU6-288P-201ENST00000363690 104 ntBASIC2.74□□□□□ -1.97
VCLP18206 SNORA5B-201ENST00000363786 132 ntBASIC2.74□□□□□ -1.97
VCLP18206 RNU5E-5P-201ENST00000365379 116 ntBASIC2.74□□□□□ -1.97
VCLP18206 RNU6-14P-201ENST00000384630 106 ntBASIC2.74□□□□□ -1.97
VCLP18206 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
VCLP18206 MIR627-201ENST00000384979 97 ntBASIC2.74□□□□□ -1.97
VCLP18206 RNU6-750P-201ENST00000390946 107 ntBASIC2.74□□□□□ -1.97
VCLP18206 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCLP18206 AC096649.2-201ENST00000416186 393 ntBASIC2.74□□□□□ -1.97
VCLP18206 SEPT2P1-201ENST00000419651 180 ntBASIC2.74□□□□□ -1.97
VCLP18206 AL365203.2-201ENST00000423444 196 ntBASIC2.74□□□□□ -1.97
VCLP18206 SKA2P1-201ENST00000425592 390 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC137499.1-201ENST00000427602 88 ntBASIC2.74□□□□□ -1.97
VCLP18206 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.74□□□□□ -1.97
VCLP18206 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.74□□□□□ -1.97
VCLP18206 AC119618.1-201ENST00000434191 222 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC098831.1-201ENST00000440661 216 ntBASIC2.74□□□□□ -1.97
VCLP18206 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.74□□□□□ -1.97
VCLP18206 USP9YP12-201ENST00000450481 570 ntBASIC2.74□□□□□ -1.97
VCLP18206 AL133217.1-201ENST00000450980 425 ntBASIC2.74□□□□□ -1.97
VCLP18206 RPL39P36-201ENST00000490784 156 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC026801.1-201ENST00000497178 464 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC091826.1-201ENST00000514065 313 ntBASIC2.74□□□□□ -1.97
VCLP18206 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
VCLP18206 RNU6-1092P-201ENST00000516955 87 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.74□□□□□ -1.97
VCLP18206 GTF3AP2-201ENST00000557014 266 ntBASIC2.74□□□□□ -1.97
VCLP18206 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.74□□□□□ -1.97
VCLP18206 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.74□□□□□ -1.97
VCLP18206 AC007363.1-201ENST00000604736 620 ntBASIC2.74□□□□□ -1.97
VCLP18206 AL031775.1-201ENST00000607014 887 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC011939.3-201ENST00000613686 466 ntBASIC2.74□□□□□ -1.97
VCLP18206 AC104010.1-201ENST00000616889 150 ntBASIC2.74□□□□□ -1.97
VCLP18206 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCLP18206 OR5J1P-201ENST00000313544 939 ntBASIC2.73□□□□□ -1.97
VCLP18206 RNU6-553P-201ENST00000364047 96 ntBASIC2.73□□□□□ -1.97
VCLP18206 RNU5E-6P-201ENST00000365574 115 ntBASIC2.73□□□□□ -1.97
VCLP18206 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 SNORA18.3-201ENST00000384122 132 ntBASIC2.73□□□□□ -1.97
VCLP18206 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VCLP18206 AL512633.1-201ENST00000399931 655 ntBASIC2.73□□□□□ -1.97
VCLP18206 RNU4-72P-201ENST00000410754 173 ntBASIC2.73□□□□□ -1.97
VCLP18206 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 AL353729.1-201ENST00000425044 720 ntBASIC2.73□□□□□ -1.97
VCLP18206 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.73□□□□□ -1.97
VCLP18206 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 UBE2D3P4-201ENST00000441973 436 ntBASIC2.73□□□□□ -1.97
VCLP18206 EPS15P1-201ENST00000448836 336 ntBASIC2.73□□□□□ -1.97
VCLP18206 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 MTATP6P7-201ENST00000453315 681 ntBASIC2.73□□□□□ -1.97
VCLP18206 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.73□□□□□ -1.97
VCLP18206 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 AC106038.2-201ENST00000520706 568 ntBASIC2.73□□□□□ -1.97
VCLP18206 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.73□□□□□ -1.97
VCLP18206 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.73□□□□□ -1.97
VCLP18206 WISP1-OT1-201ENST00000602893 642 ntBASIC2.73□□□□□ -1.97
VCLP18206 AL358072.1-201ENST00000604156 575 ntBASIC2.73□□□□□ -1.97
VCLP18206 AC012360.2-201ENST00000609349 391 ntBASIC2.73□□□□□ -1.97
VCLP18206 AC103710.2-201ENST00000609912 942 ntBASIC2.73□□□□□ -1.97
VCLP18206 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.73□□□□□ -1.97
VCLP18206 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
VCLP18206 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VCLP18206 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VCLP18206 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.73□□□□□ -1.97
VCLP18206 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.73□□□□□ -1.97
VCLP18206 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.73□□□□□ -1.97
VCLP18206 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VCLP18206 RNA5SP393-201ENST00000363423 117 ntBASIC2.72□□□□□ -1.97
VCLP18206 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
VCLP18206 MIR9-1-201ENST00000385198 89 ntBASIC2.72□□□□□ -1.97
VCLP18206 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VCLP18206 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.72□□□□□ -1.97
VCLP18206 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
VCLP18206 RPS12P24-201ENST00000412619 387 ntBASIC2.72□□□□□ -1.97
VCLP18206 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.72□□□□□ -1.97
VCLP18206 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms