Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MMP3P08254 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MMP3P08254 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 AC092326.2-201ENST00000624772 1561 ntBASIC3.42□□□□□ -1.86
MMP3P08254 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
MMP3P08254 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.42□□□□□ -1.86
MMP3P08254 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
MMP3P08254 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MMP3P08254 RNU6-1322P-201ENST00000364309 107 ntBASIC3.42□□□□□ -1.86
MMP3P08254 SMIM11P1-201ENST00000369586 178 ntBASIC3.42□□□□□ -1.86
MMP3P08254 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
MMP3P08254 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
MMP3P08254 NDUFS5P1-201ENST00000405668 289 ntBASIC3.42□□□□□ -1.86
MMP3P08254 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
MMP3P08254 RNU6-954P-201ENST00000411355 107 ntBASIC3.42□□□□□ -1.86
MMP3P08254 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
MMP3P08254 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.42□□□□□ -1.86
MMP3P08254 AL353572.1-201ENST00000442490 417 ntBASIC3.42□□□□□ -1.86
MMP3P08254 AL162395.1-201ENST00000457882 422 ntBASIC3.42□□□□□ -1.86
MMP3P08254 snoU13.4-201ENST00000458916 104 ntBASIC3.42□□□□□ -1.86
MMP3P08254 VN1R104P-201ENST00000505115 1009 ntBASIC3.42□□□□□ -1.86
MMP3P08254 RNU6-1092P-201ENST00000516955 87 ntBASIC3.42□□□□□ -1.86
MMP3P08254 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.42□□□□□ -1.86
MMP3P08254 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.42□□□□□ -1.86
MMP3P08254 OR5D17P-201ENST00000531492 978 ntBASIC3.42□□□□□ -1.86
MMP3P08254 OR5AL2P-201ENST00000532185 920 ntBASIC3.42□□□□□ -1.86
MMP3P08254 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.42□□□□□ -1.86
MMP3P08254 AC007619.2-201ENST00000605743 379 ntBASIC3.42□□□□□ -1.86
MMP3P08254 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.42□□□□□ -1.86
MMP3P08254 AC010133.1-201ENST00000615809 842 ntBASIC3.42□□□□□ -1.86
MMP3P08254 AL354950.2-201ENST00000617939 290 ntBASIC3.42□□□□□ -1.86
MMP3P08254 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.42□□□□□ -1.86
MMP3P08254 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.42□□□□□ -1.86
MMP3P08254 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
MMP3P08254 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
MMP3P08254 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MMP3P08254 RPS4XP5-202ENST00000449995 1334 ntBASIC3.42□□□□□ -1.86
MMP3P08254 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
MMP3P08254 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
MMP3P08254 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MMP3P08254 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MMP3P08254 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP3P08254 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
MMP3P08254 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
MMP3P08254 RNU6-1284P-201ENST00000363701 100 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RNU6-173P-201ENST00000364215 104 ntBASIC3.41□□□□□ -1.86
MMP3P08254 SNORA69-201ENST00000383895 132 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RNU6-1181P-201ENST00000384191 106 ntBASIC3.41□□□□□ -1.86
MMP3P08254 SNORA36C-201ENST00000384289 132 ntBASIC3.41□□□□□ -1.86
MMP3P08254 MTCYBP8-201ENST00000422855 651 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RAC1P6-201ENST00000423911 575 ntBASIC3.41□□□□□ -1.86
MMP3P08254 DUTP6-201ENST00000425573 462 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC008850.1-201ENST00000427546 362 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.41□□□□□ -1.86
MMP3P08254 AC016691.1-201ENST00000441321 413 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP3P08254 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
MMP3P08254 RPL23AP31-201ENST00000456160 467 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP3P08254 AC022364.2-201ENST00000457963 554 ntBASIC3.41□□□□□ -1.86
MMP3P08254 MRPS17P3-201ENST00000465453 385 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC083798.1-201ENST00000472671 131 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC117440.1-201ENST00000474107 571 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RN7SL429P-201ENST00000479090 223 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RN7SL489P-201ENST00000486185 223 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RN7SL327P-201ENST00000488659 223 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP3P08254 AC116562.3-201ENST00000506136 177 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RNA5SP401-201ENST00000515920 127 ntBASIC3.41□□□□□ -1.86
MMP3P08254 SNORD27.1-201ENST00000516319 72 ntBASIC3.41□□□□□ -1.86
MMP3P08254 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP3P08254 AC068587.5-201ENST00000528506 175 ntBASIC3.41□□□□□ -1.86
MMP3P08254 OR5B19P-201ENST00000531766 928 ntBASIC3.41□□□□□ -1.86
MMP3P08254 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.41□□□□□ -1.86
MMP3P08254 AL512310.1-201ENST00000548639 172 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC093012.1-202ENST00000549403 582 ntBASIC3.41□□□□□ -1.86
MMP3P08254 MED28P6-201ENST00000558776 231 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.41□□□□□ -1.86
MMP3P08254 AC055876.1-202ENST00000567053 138 ntBASIC3.41□□□□□ -1.86
MMP3P08254 HMGB1P6-201ENST00000569046 646 ntBASIC3.41□□□□□ -1.86
MMP3P08254 MTCO3P24-201ENST00000572729 782 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC024619.4-201ENST00000580924 316 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AC008945.2-201ENST00000606056 604 ntBASIC3.41□□□□□ -1.86
MMP3P08254 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP3P08254 SDR42E1P2-201ENST00000614861 481 ntBASIC3.41□□□□□ -1.86
MMP3P08254 RN7SL853P-201ENST00000617250 223 ntBASIC3.41□□□□□ -1.86
MMP3P08254 YWHAEP7-203ENST00000622054 312 ntBASIC3.41□□□□□ -1.86
MMP3P08254 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP3P08254 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP3P08254 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP3P08254 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.41□□□□□ -1.86
MMP3P08254 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
MMP3P08254 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.86
MMP3P08254 RNU5A-1-201ENST00000362698 116 ntBASIC3.4□□□□□ -1.87
MMP3P08254 SNORA7.2-201ENST00000364446 145 ntBASIC3.4□□□□□ -1.87
MMP3P08254 Y_RNA.303-201ENST00000364998 94 ntBASIC3.4□□□□□ -1.87
MMP3P08254 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
MMP3P08254 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
MMP3P08254 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms