Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFAP04085 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFAP04085 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 RPL36AP10-201ENST00000421785 322 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 BX323845.1-201ENST00000432417 179 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFAP04085 RPL31P13-201ENST00000484151 370 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 RPL23AP49-201ENST00000492925 468 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFAP04085 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFAP04085 RN7SKP46-201ENST00000515942 234 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 AP004607.1-201ENST00000524456 203 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
PDGFAP04085 AP005432.2-201ENST00000608162 586 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFAP04085 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PDGFAP04085 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PDGFAP04085 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.68□□□□□ -1.66
PDGFAP04085 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 Y_RNA.352-201ENST00000365439 102 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AC068538.1-201ENST00000376856 336 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 Y_RNA.785-201ENST00000384290 109 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 RNA5SP332-201ENST00000391063 115 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 RNA5SP113-201ENST00000410486 84 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 RNA5SP31-201ENST00000411144 127 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 TMEM167AP1-201ENST00000423409 219 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AC092047.1-201ENST00000424997 240 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFAP04085 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFAP04085 NUTF2P7-201ENST00000453086 375 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 snoU13.30-201ENST00000458951 104 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 RN7SL319P-201ENST00000480656 221 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 HMGB3P16-201ENST00000508037 287 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AC006427.1-201ENST00000514359 712 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 Vault.1-201ENST00000516474 102 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AC090617.3-201ENST00000573670 475 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 MIR4300-201ENST00000581016 96 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AC009779.6-201ENST00000603972 165 ntBASIC4.67□□□□□ -1.66
PDGFAP04085 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PDGFAP04085 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFAP04085 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PDGFAP04085 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFAP04085 OR14L1P-202ENST00000641545 3009 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 OR1L6-202ENST00000373684 1044 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 MIR215-201ENST00000384858 110 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 MRPL35P1-201ENST00000404272 572 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFAP04085 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFAP04085 MTND2P29-201ENST00000438595 412 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFAP04085 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFAP04085 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 AURKAPS2-201ENST00000454983 333 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFAP04085 RPS23P5-201ENST00000495419 428 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AC078918.1-201ENST00000498515 228 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 GZMAP1-201ENST00000503054 631 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.66□□□□□ -1.66
PDGFAP04085 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFAP04085 RNU6-703P-201ENST00000516946 107 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AC134698.5-201ENST00000519444 336 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 RRN3P3-201ENST00000549207 578 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AC107016.1-201ENST00000550463 337 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 AC024153.1-201ENST00000603103 365 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AC108738.1-201ENST00000603703 237 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 AL391358.1-201ENST00000605342 190 ntBASIC4.66□□□□□ -1.66
PDGFAP04085 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDGFAP04085 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFAP04085 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.65□□□□□ -1.66
PDGFAP04085 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
PDGFAP04085 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFAP04085 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFAP04085 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFAP04085 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.65□□□□□ -1.66
PDGFAP04085 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFAP04085 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms