Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM13O60858 GABPAP-201ENST00000419271 1356 ntBASIC4.21□□□□□ -1.74
TRIM13O60858 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM13O60858 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM13O60858 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM13O60858 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
TRIM13O60858 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM13O60858 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM13O60858 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM13O60858 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM13O60858 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TRIM13O60858 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 Y_RNA.151-201ENST00000363566 112 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 Y_RNA.183-201ENST00000363882 113 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RNU6-596P-201ENST00000365395 98 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RNU6-946P-201ENST00000383878 107 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 SNORA70F-201ENST00000384142 135 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RNU6-821P-201ENST00000390995 107 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RNU6-493P-201ENST00000391321 108 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 AL645927.1-201ENST00000396783 406 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 SPTLC1P2-201ENST00000407089 121 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RNU6-174P-201ENST00000410406 106 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RNA5SP306-201ENST00000411087 107 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RPS27AP12-201ENST00000429552 465 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM13O60858 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RPL35AP22-201ENST00000436855 335 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 CEACAMP6-201ENST00000452007 574 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM13O60858 RNU7-120P-201ENST00000459334 63 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 RPS27AP1-201ENST00000475545 471 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM13O60858 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
TRIM13O60858 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM13O60858 Y_RNA.683-201ENST00000516508 93 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 AC034114.1-201ENST00000520293 285 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 CBX3P4-201ENST00000538909 354 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 AC073410.2-201ENST00000603240 332 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 AC006023.2-201ENST00000609916 167 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM13O60858 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM13O60858 AP005019.3-201ENST00000620418 560 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.2□□□□□ -1.74
TRIM13O60858 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRIM13O60858 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM13O60858 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM13O60858 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 AL391987.6-201ENST00000305671 199 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 Y_RNA.81-201ENST00000362997 102 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 RNU6-1078P-201ENST00000364522 103 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 Y_RNA.269-201ENST00000364685 89 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
TRIM13O60858 Y_RNA.471-201ENST00000384312 102 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 SNORA70E-201ENST00000384492 135 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 MIR1298-201ENST00000408783 112 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 BX510359.3-201ENST00000422168 306 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM13O60858 RPS17P13-201ENST00000448974 407 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 IFNWP4-201ENST00000453148 294 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 AL136097.1-201ENST00000456945 913 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM13O60858 AC098869.1-201ENST00000481627 292 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 RN7SL432P-201ENST00000484057 298 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 RPS26P15-201ENST00000488067 348 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 AC110792.1-201ENST00000491826 472 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 NDUFB5P1-201ENST00000508134 564 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 SNORA25.14-201ENST00000516481 132 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM13O60858 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM13O60858 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 AL355877.2-201ENST00000603670 358 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 BX284668.6-201ENST00000606899 438 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 AC004832.4-201ENST00000608952 331 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 SDR42E1P1-201ENST00000611327 477 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 MIR6729-201ENST00000618194 65 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 MIR6715B-201ENST00000637172 77 ntBASIC4.19□□□□□ -1.74
TRIM13O60858 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRIM13O60858 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
TRIM13O60858 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TRIM13O60858 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM13O60858 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM13O60858 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
TRIM13O60858 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM13O60858 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM13O60858 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM13O60858 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM13O60858 FAM91A3P-201ENST00000456826 2544 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM13O60858 MAPK10-253ENST00000641010 4072 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 RNU6-1284P-201ENST00000363701 100 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 SMIM11P1-201ENST00000369586 178 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 SNORA37-201ENST00000384504 129 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 SNORA11F-201ENST00000408237 128 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 MIR1179-201ENST00000408703 91 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms