Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXA2O43364 RN7SKP185-201ENST00000362813 326 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 Y_RNA.446-201ENST00000384178 104 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 RNU6-72P-201ENST00000384285 79 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 FAR2P2-201ENST00000413041 594 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 RPL17P36-201ENST00000420302 549 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 CYP4F29P-201ENST00000420685 446 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 CYCSP32-201ENST00000440548 321 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 AC112498.1-201ENST00000444401 332 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 UQCRBP2-201ENST00000447827 297 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXA2O43364 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA2O43364 snoU13.29-201ENST00000459370 104 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 RPL31P13-201ENST00000484151 370 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 RPL23AP49-201ENST00000492925 468 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA2O43364 RNA5SP43-201ENST00000516559 110 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 RNU6-567P-201ENST00000516746 107 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 IGKV1-32-201ENST00000519290 311 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA2O43364 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXA2O43364 RPL21P9-201ENST00000556149 474 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 MIR4270-201ENST00000581799 70 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 AC007390.2-201ENST00000606229 3803 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 AC005296.1-201ENST00000616145 209 ntBASIC5.52□□□□□ -1.53
HOXA2O43364 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA2O43364 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA2O43364 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA2O43364 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HOXA2O43364 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXA2O43364 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA2O43364 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA2O43364 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
HOXA2O43364 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HOXA2O43364 ABCC13-202ENST00000463099 3842 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXA2O43364 AL022322.2-201ENST00000624072 20397 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA2O43364 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 AC135776.4-201ENST00000624300 1904 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
HOXA2O43364 AC004656.1-201ENST00000568479 4951 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RNU6-626P-201ENST00000363354 107 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RNU6-527P-201ENST00000363425 104 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RNVU1-6-201ENST00000364688 164 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RNA5SP213-201ENST00000391031 106 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 MIR1290-201ENST00000408735 78 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 Y_RNA.597-201ENST00000410463 100 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 AC098614.2-201ENST00000426040 255 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 MRPS10P1-201ENST00000448483 130 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXA2O43364 AC006026.2-201ENST00000457376 180 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RNA5SP165-201ENST00000517142 115 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RN7SL52P-201ENST00000584271 284 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXA2O43364 RN7SL722P-201ENST00000617780 284 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RN7SL565P-201ENST00000618246 284 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA2O43364 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
HOXA2O43364 MAPK10-349ENST00000641767 3661 ntBASIC5.51□□□□□ -1.53
HOXA2O43364 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXA2O43364 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA2O43364 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA2O43364 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXA2O43364 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXA2O43364 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXA2O43364 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA2O43364 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HOXA2O43364 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXA2O43364 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA2O43364 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA2O43364 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA2O43364 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXA2O43364 RNU6-1175P-201ENST00000365200 107 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA2O43364 RNU6-20P-201ENST00000384106 107 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 SNORA48.4-201ENST00000391089 134 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 RNU2-68P-201ENST00000410878 191 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA2O43364 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA2O43364 H3F3BP1-201ENST00000440551 403 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA2O43364 RN7SL738P-201ENST00000470264 297 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 AC108043.1-201ENST00000512696 574 ntBASIC5.5□□□□□ -1.53
HOXA2O43364 RNU4-60P-201ENST00000517239 135 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms