Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CHD1O14646 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CHD1O14646 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.35□□□□□ -2.19
CHD1O14646 RNU6-19P-201ENST00000384718 107 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC092745.2-202ENST00000411880 369 ntBASIC1.35□□□□□ -2.19
CHD1O14646 MTCO3P12-201ENST00000416718 547 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AL034418.1-201ENST00000448675 860 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.35□□□□□ -2.19
CHD1O14646 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.35□□□□□ -2.19
CHD1O14646 RPS20P20-201ENST00000460498 340 ntBASIC1.35□□□□□ -2.19
CHD1O14646 MRPS33P3-201ENST00000513456 322 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC021749.1-201ENST00000604322 607 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC009229.3-201ENST00000608056 282 ntBASIC1.35□□□□□ -2.19
CHD1O14646 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CHD1O14646 AC087359.1-201ENST00000508335 1740 ntBASIC1.35□□□□□ -2.19
CHD1O14646 MIR147B-201ENST00000390185 80 ntBASIC1.35□□□□□ -2.19
CHD1O14646 OR6C66P-201ENST00000414917 930 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC018630.2-202ENST00000422992 927 ntBASIC1.35□□□□□ -2.19
CHD1O14646 SDAD1P3-201ENST00000427380 333 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.35□□□□□ -2.19
CHD1O14646 AC133485.1-201ENST00000567176 124 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC138907.6-201ENST00000568401 126 ntBASIC1.35□□□□□ -2.19
CHD1O14646 MIR4529-201ENST00000578110 78 ntBASIC1.35□□□□□ -2.19
CHD1O14646 OR1M4P-201ENST00000589199 287 ntBASIC1.35□□□□□ -2.19
CHD1O14646 AC040174.2-201ENST00000602701 465 ntBASIC1.35□□□□□ -2.19
CHD1O14646 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.34□□□□□ -2.2
CHD1O14646 RPL7L1P10-201ENST00000427790 463 ntBASIC1.34□□□□□ -2.2
CHD1O14646 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.34□□□□□ -2.2
CHD1O14646 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.2
CHD1O14646 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.34□□□□□ -2.2
CHD1O14646 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.2
CHD1O14646 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.34□□□□□ -2.2
CHD1O14646 SNORD14A-201ENST00000606526 91 ntBASIC1.34□□□□□ -2.2
CHD1O14646 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.34□□□□□ -2.2
CHD1O14646 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.2
CHD1O14646 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
CHD1O14646 RNU6-16P-201ENST00000384385 107 ntBASIC1.33□□□□□ -2.2
CHD1O14646 RNU4-78P-201ENST00000410940 126 ntBASIC1.33□□□□□ -2.2
CHD1O14646 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.33□□□□□ -2.2
CHD1O14646 BX248409.1-201ENST00000455497 255 ntBASIC1.33□□□□□ -2.2
CHD1O14646 AC026801.1-201ENST00000497178 464 ntBASIC1.33□□□□□ -2.2
CHD1O14646 AC096751.1-202ENST00000502691 1067 ntBASIC1.33□□□□□ -2.2
CHD1O14646 RNU7-193P-201ENST00000516723 65 ntBASIC1.33□□□□□ -2.2
CHD1O14646 POLR2KP1-201ENST00000553226 168 ntBASIC1.33□□□□□ -2.2
CHD1O14646 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.33□□□□□ -2.2
CHD1O14646 AC007038.2-201ENST00000608095 740 ntBASIC1.33□□□□□ -2.2
CHD1O14646 AC003001.2-201ENST00000616294 831 ntBASIC1.33□□□□□ -2.2
CHD1O14646 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.33□□□□□ -2.2
CHD1O14646 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.33□□□□□ -2.2
CHD1O14646 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CHD1O14646 RNU4-31P-201ENST00000384211 141 ntBASIC1.32□□□□□ -2.2
CHD1O14646 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
CHD1O14646 OFD1P18Y-201ENST00000420889 959 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CHD1O14646 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD1O14646 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD1O14646 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.32□□□□□ -2.2
CHD1O14646 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CHD1O14646 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD1O14646 MTCO2P22-201ENST00000603246 681 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AC103810.9-201ENST00000606688 112 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AC135507.1-201ENST00000607214 561 ntBASIC1.32□□□□□ -2.2
CHD1O14646 OR4G3P-201ENST00000633500 913 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.32□□□□□ -2.2
CHD1O14646 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD1O14646 USP12PX-201ENST00000432383 1057 ntBASIC1.32□□□□□ -2.2
CHD1O14646 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD1O14646 AP001960.1-201ENST00000506494 658 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD1O14646 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.32□□□□□ -2.2
CHD1O14646 FAM60BP-201ENST00000578364 658 ntBASIC1.32□□□□□ -2.2
CHD1O14646 AC008555.8-201ENST00000623602 2168 ntBASIC1.31□□□□□ -2.2
CHD1O14646 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
CHD1O14646 RNU6-263P-201ENST00000363811 107 ntBASIC1.31□□□□□ -2.2
CHD1O14646 RNU6-173P-201ENST00000364215 104 ntBASIC1.31□□□□□ -2.2
CHD1O14646 U3.29-201ENST00000391296 212 ntBASIC1.31□□□□□ -2.2
CHD1O14646 RPS15AP38-201ENST00000413110 372 ntBASIC1.31□□□□□ -2.2
CHD1O14646 OR52A4P-202ENST00000481634 799 ntBASIC1.31□□□□□ -2.2
CHD1O14646 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.31□□□□□ -2.2
CHD1O14646 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.31□□□□□ -2.2
CHD1O14646 AC090517.3-201ENST00000625170 141 ntBASIC1.31□□□□□ -2.2
CHD1O14646 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CHD1O14646 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CHD1O14646 MIR934-201ENST00000401241 83 ntBASIC1.3□□□□□ -2.2
CHD1O14646 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.3□□□□□ -2.2
CHD1O14646 SEPT2P1-201ENST00000419651 180 ntBASIC1.3□□□□□ -2.2
CHD1O14646 AC012497.1-201ENST00000429392 575 ntBASIC1.3□□□□□ -2.2
CHD1O14646 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.3□□□□□ -2.2
CHD1O14646 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.3□□□□□ -2.2
CHD1O14646 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.3□□□□□ -2.2
CHD1O14646 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.3□□□□□ -2.2
CHD1O14646 PRR13P7-201ENST00000605538 430 ntBASIC1.3□□□□□ -2.2
CHD1O14646 AL360181.4-201ENST00000621752 134 ntBASIC1.3□□□□□ -2.2
CHD1O14646 RNU6-115P-201ENST00000364310 107 ntBASIC1.29□□□□□ -2.2
CHD1O14646 U3.20-201ENST00000390909 217 ntBASIC1.29□□□□□ -2.2
CHD1O14646 RNU6-244P-201ENST00000391028 104 ntBASIC1.29□□□□□ -2.2
CHD1O14646 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD1O14646 AC027575.1-201ENST00000481064 460 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms