Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC023424.1-201ENST00000496058 459 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 AC108145.1-201ENST00000503770 153 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 CYCSP23-201ENST00000519781 313 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 ZNF192P1-203ENST00000565888 810 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 MIR3145-201ENST00000580727 82 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 AP005432.2-201ENST00000608162 586 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 AL357075.2-201ENST00000614906 189 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 MIR4302-201ENST00000638058 60 ntBASIC5.53□□□□□ -1.52
RCCD1A6NED2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RCCD1A6NED2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RCCD1A6NED2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RCCD1A6NED2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RCCD1A6NED2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RCCD1A6NED2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RCCD1A6NED2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RCCD1A6NED2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RCCD1A6NED2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RCCD1A6NED2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RCCD1A6NED2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RCCD1A6NED2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 RNA5SP335-201ENST00000363817 110 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 U3.19-201ENST00000390893 196 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 MIR513C-201ENST00000401352 84 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 OR2AM1P-201ENST00000422137 422 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 RPL7AP25-201ENST00000423357 805 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 RPL27AP8-201ENST00000424277 446 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 AL590383.1-201ENST00000428602 75 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 AL590399.4-201ENST00000436561 601 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 AC010095.1-201ENST00000443543 144 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 CYCSP51-201ENST00000443545 318 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 AL161636.2-201ENST00000445179 927 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 PPIAP20-201ENST00000449839 135 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 RPS20P10-201ENST00000451209 253 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 UBE2CP3-201ENST00000502715 450 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 Y_RNA.797-201ENST00000515977 94 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 MIR1273E-201ENST00000581165 102 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 AC010999.1-201ENST00000611856 324 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 SNORA43.4-201ENST00000629559 138 ntBASIC5.52□□□□□ -1.53
RCCD1A6NED2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RCCD1A6NED2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.52□□□□□ -1.53
RCCD1A6NED2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 RNA5SP90-201ENST00000364801 99 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 MIR487A-201ENST00000385009 80 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 DDX39BP1-205ENST00000422507 192 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 AL139148.1-201ENST00000427122 680 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 RPL35AP21-201ENST00000437667 333 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 AL391987.1-201ENST00000441025 200 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AC093840.1-201ENST00000511599 336 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 RPL10P14-201ENST00000565265 298 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AC010547.6-201ENST00000571789 193 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 AC011487.3-201ENST00000593607 453 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AP002826.1-201ENST00000608835 315 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AC090132.2-201ENST00000615881 347 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 AC092628.2-201ENST00000622492 339 ntBASIC5.51□□□□□ -1.53
RCCD1A6NED2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RCCD1A6NED2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
RCCD1A6NED2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 AL450326.2-201ENST00000421913 1962 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 RNU6-834P-201ENST00000362367 110 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 U3.3-201ENST00000362986 216 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 RNU6-80P-201ENST00000384195 107 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 RNA5SP487-201ENST00000410186 122 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms