Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AP002404.1-201ENST00000532005 451 ntBASIC3.22□□□□□ -1.89
CLIC4Q9Y696 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIC4Q9Y696 AC098848.2-201ENST00000588023 330 ntBASIC3.22□□□□□ -1.89
CLIC4Q9Y696 DPPA3P3-201ENST00000603842 430 ntBASIC3.22□□□□□ -1.89
CLIC4Q9Y696 AL589994.2-201ENST00000621124 579 ntBASIC3.22□□□□□ -1.89
CLIC4Q9Y696 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIC4Q9Y696 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIC4Q9Y696 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIC4Q9Y696 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIC4Q9Y696 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIC4Q9Y696 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 Y_RNA.22-201ENST00000362492 102 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 SMIM11P1-201ENST00000369586 178 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 RNU6-641P-201ENST00000384006 107 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 RNU6-456P-201ENST00000384493 107 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 FAT1P1-201ENST00000406588 507 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 RNU2-39P-201ENST00000410604 198 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 RPS20P5-201ENST00000434808 360 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 SNRPEP4-201ENST00000435815 279 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 NEFMP1-201ENST00000443423 1006 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC087588.1-201ENST00000462203 316 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC007182.2-201ENST00000489251 402 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 TTC39CP1-201ENST00000512513 755 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 HPRT1P3-201ENST00000539521 576 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 SUB1P2-201ENST00000556401 297 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC007998.5-201ENST00000622938 237 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC009161.2-201ENST00000624626 138 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 MIR6733-201ENST00000635723 61 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC096644.4-201ENST00000563417 2912 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 AC007785.2-201ENST00000598627 1916 ntBASIC3.21□□□□□ -1.9
CLIC4Q9Y696 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIC4Q9Y696 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AL161431.1-201ENST00000618966 4205 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 RNU6-188P-201ENST00000364207 107 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 SNORA1.3-201ENST00000384676 136 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 RNU6-817P-201ENST00000391083 104 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AL138885.1-201ENST00000405921 675 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 RPL35AP12-201ENST00000425362 338 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 NEK4P1-201ENST00000433383 879 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 RNA5SP310-201ENST00000459084 116 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 RPL37P6-201ENST00000460682 294 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC117522.1-201ENST00000509821 380 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 RN7SKP57-201ENST00000517248 293 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC022690.1-201ENST00000526681 550 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 H3F3AP1-201ENST00000559984 334 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC006504.3-201ENST00000586818 523 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC104763.2-201ENST00000604179 382 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC007619.2-201ENST00000605743 379 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC096577.2-201ENST00000611455 153 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC034102.8-201ENST00000615146 484 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC002076.2-201ENST00000617362 122 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 SNORA50A-202ENST00000629536 136 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC099654.12-201ENST00000639868 649 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AC000403.1-201ENST00000613696 3585 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
CLIC4Q9Y696 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIC4Q9Y696 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLIC4Q9Y696 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLIC4Q9Y696 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CLIC4Q9Y696 Y_RNA.3-201ENST00000362331 103 ntBASIC3.19□□□□□ -1.9
CLIC4Q9Y696 Y_RNA.41-201ENST00000362646 102 ntBASIC3.19□□□□□ -1.9
CLIC4Q9Y696 RNU2-33P-201ENST00000410344 192 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms