Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCFC2Q9Y5Z7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCFC2Q9Y5Z7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCFC2Q9Y5Z7 AC000123.3-201ENST00000624029 4975 ntBASIC4.31□□□□□ -1.72
HCFC2Q9Y5Z7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.31□□□□□ -1.72
HCFC2Q9Y5Z7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCFC2Q9Y5Z7 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 Y_RNA.106-201ENST00000363189 100 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 RNU6-371P-201ENST00000364283 108 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 Y_RNA.552-201ENST00000384665 112 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 MIR135A2-201ENST00000384854 100 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 PPP1R11P2-201ENST00000423543 382 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC090774.1-201ENST00000435925 246 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 OSTCP8-201ENST00000445117 448 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC093852.1-201ENST00000503587 266 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 SNORA40.14-201ENST00000516543 86 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC012119.1-201ENST00000603184 222 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 IGHV3-29-201ENST00000604817 344 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC012468.1-201ENST00000604888 430 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 AC083843.3-201ENST00000623679 2186 ntBASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCFC2Q9Y5Z7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 RNU6-1329P-201ENST00000365664 107 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 MIR30B-201ENST00000384850 88 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AL139039.1-201ENST00000401900 692 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 RPS4XP7-201ENST00000406274 780 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 RN7SKP156-201ENST00000410308 342 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 RNU2-64P-201ENST00000411315 191 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC096664.2-201ENST00000411843 406 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 PGBD4P6-201ENST00000421501 610 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 RBMY1KP-201ENST00000423480 476 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC008571.1-201ENST00000467232 300 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 SNORD116-26-201ENST00000516006 96 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 RNU6-120P-201ENST00000516077 103 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC131281.1-201ENST00000522984 164 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 FP236240.3-201ENST00000623061 327 ntBASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HCFC2Q9Y5Z7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 MAPK10-349ENST00000641767 3661 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 ZNF285B-201ENST00000561698 1767 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 Y_RNA.288-201ENST00000364854 92 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 Y_RNA.447-201ENST00000384184 113 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 RNU6-472P-201ENST00000384299 107 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 Y_RNA.577-201ENST00000384794 101 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 RPL21P1-201ENST00000399532 476 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 RNU2-3P-201ENST00000410144 191 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 AC092809.3-201ENST00000415453 231 ntBASIC4.28□□□□□ -1.72
HCFC2Q9Y5Z7 MRPS18CP6-201ENST00000423587 223 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms