Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RNU4-48P-201ENST00000365559 182 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.378-201ENST00000365652 113 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.404-201ENST00000383978 102 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.428-201ENST00000384078 102 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1029P-201ENST00000384109 107 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 SNORD17-201ENST00000390930 237 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL079342.1-201ENST00000401460 267 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL606923.1-201ENST00000406616 190 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RPS15AP12-201ENST00000419498 388 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC048351.1-201ENST00000420064 602 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC018865.2-201ENST00000423631 129 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 HMGB1P9-201ENST00000429856 646 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RPL27AP5-201ENST00000469428 449 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RNU6-237P-201ENST00000515985 71 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 SNORD27.1-201ENST00000516319 72 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL121576.1-201ENST00000556055 276 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AP001029.3-201ENST00000588063 596 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 GLUD1P4-201ENST00000590914 418 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL732372.2-225ENST00000642124 456 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC093311.1-201ENST00000506586 2021 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL161781.1-201ENST00000354277 403 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 MT-TP-201ENST00000387461 68 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 ARF4P3-201ENST00000397387 509 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AL391417.1-201ENST00000404100 426 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RNU6-55P-201ENST00000411092 107 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 OOSP1P1-201ENST00000423265 274 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC005326.1-201ENST00000429197 123 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC119618.1-201ENST00000434191 222 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC092013.1-201ENST00000438795 332 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 RPS29P15-201ENST00000458329 171 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 MIR2053-201ENST00000459295 91 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AP001025.2-201ENST00000490908 477 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC097473.1-201ENST00000508142 408 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 IMMP1LP2-201ENST00000552954 492 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 BNIP3P16-201ENST00000589779 534 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 MIR7973-1-201ENST00000614683 76 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 ATP5A1P2-202ENST00000616464 443 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 FTX_2.1-201ENST00000618816 94 ntBASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.73□□□□□ -1.97
NOTCH3Q9UM47 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AL049641.1-201ENST00000441055 1948 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.364-201ENST00000365532 101 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 RNA5SP120-201ENST00000410900 112 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC139712.2-201ENST00000424302 339 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 PIGPP3-201ENST00000425307 415 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC005019.1-201ENST00000436455 431 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 TRGVB-201ENST00000453257 471 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC022795.1-201ENST00000473808 480 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 RPL32P34-201ENST00000486380 400 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 HIGD1AP13-201ENST00000509878 289 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 RNU6-470P-201ENST00000515954 104 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 SNORA70.18-201ENST00000516696 98 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1213P-201ENST00000517075 94 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 MTND4P7-201ENST00000523876 130 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC018552.3-201ENST00000567416 561 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC104984.5-201ENST00000586878 94 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 SNORA62.6-201ENST00000606322 83 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AP001521.1-201ENST00000609150 300 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC098479.1-201ENST00000609225 154 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 AC121333.1-201ENST00000567488 2709 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 KPNA2P1-201ENST00000458289 1591 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 BTBD10P1-201ENST00000549824 1352 ntBASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.117-201ENST00000363294 101 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.152-201ENST00000363578 100 ntBASIC2.71□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms