Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RANP8-201ENST00000444720 713 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 U8.22-201ENST00000459141 133 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC010409.1-201ENST00000487382 476 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AL160314.1-201ENST00000490836 438 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 RNU5F-8P-201ENST00000515941 111 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 SNORA27.4-201ENST00000516650 95 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AK6P2-201ENST00000549020 471 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC126915.2-201ENST00000610957 190 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC011476.5-201ENST00000615594 130 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 NEAT1-202ENST00000501122 22743 ntBASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.12□□□□□ -1.59
CUEDC1Q9NWM3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RAD17P1-201ENST00000418130 2042 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.308-201ENST00000365043 101 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-1289P-201ENST00000384431 106 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 SNORA46.1-201ENST00000391069 153 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 AC016397.1-201ENST00000412463 242 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RPS11P7-201ENST00000442125 465 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 SSXP4-201ENST00000451349 245 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 AC009220.1-201ENST00000451614 275 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RPS26P21-201ENST00000475397 348 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RNU1-86P-201ENST00000516108 154 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RNU2-58P-201ENST00000516403 183 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 RNU1-107P-201ENST00000516617 154 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 BRDTP1-201ENST00000605735 677 ntBASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CUEDC1Q9NWM3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AC000123.3-201ENST00000624029 4975 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 RPL23P2-201ENST00000320371 421 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 RNA5SP52-201ENST00000362448 134 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 RNU5A-1-201ENST00000362698 116 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.262-201ENST00000364641 102 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.286-201ENST00000364813 102 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AC245028.1-201ENST00000423259 256 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AC034236.1-201ENST00000469891 373 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AC091959.1-201ENST00000495857 238 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AC005840.1-201ENST00000498412 377 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 AC069307.1-201ENST00000602820 447 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 PRO1804-201ENST00000623780 2050 ntBASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUEDC1Q9NWM3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 Y_RNA.127-201ENST00000363386 109 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-827P-201ENST00000365553 106 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 SNORA67-201ENST00000384423 137 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RNU6-257P-201ENST00000410238 98 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 SNORD56-201ENST00000413522 71 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AC108075.1-201ENST00000424692 529 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 MTATP6P4-201ENST00000427725 675 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 RPL7AP49-201ENST00000429522 581 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AL591438.1-201ENST00000433508 581 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AC090804.1-201ENST00000448870 490 ntBASIC5.09□□□□□ -1.59
CUEDC1Q9NWM3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms