Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 DPPA3P3-201ENST00000603842 430 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC107871.2-201ENST00000612894 502 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC005858.4-201ENST00000623191 700 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AL139397.2-201ENST00000404529 772 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 SEPT2P1-201ENST00000419651 180 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC137499.1-201ENST00000427602 88 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 ELOCP14-201ENST00000428070 331 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 ELOCP7-201ENST00000439968 331 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 RPS24P13-201ENST00000442520 397 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AL033523.1-201ENST00000605153 153 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AP000860.1-201ENST00000605250 559 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC107294.1-201ENST00000609524 467 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AL158063.1-201ENST00000615349 536 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC108479.2-201ENST00000617314 601 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC048344.4-201ENST00000619744 527 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC025048.6-202ENST00000627667 438 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 AC099654.7-201ENST00000635788 2127 ntBASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC4Q9NTJ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 RNU4-1-201ENST00000363925 141 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 RNU6-817P-201ENST00000391083 104 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL512633.1-201ENST00000399931 655 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 MRPL42P2-201ENST00000403169 426 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 HMGB1P27-201ENST00000431429 603 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC098826.1-201ENST00000433943 471 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC112220.1-201ENST00000434628 355 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 ARPC3P1-201ENST00000437218 533 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 HMGB3P12-201ENST00000438745 556 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL031667.1-201ENST00000440222 725 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 PGBD4P3-201ENST00000440731 581 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL022238.1-201ENST00000442557 355 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 RPL37P6-201ENST00000460682 294 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 MTND4LP3-201ENST00000468320 276 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC090525.1-201ENST00000479116 478 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 RNA5SP367-201ENST00000516557 118 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 RPL21P5-201ENST00000554662 472 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL391261.3-201ENST00000557194 520 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC098826.3-201ENST00000603823 466 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL161798.1-201ENST00000604630 131 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC080013.6-201ENST00000606185 215 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC135507.1-201ENST00000607214 561 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC069234.5-201ENST00000611056 416 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC025594.3-201ENST00000613068 790 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC006338.1-201ENST00000618453 749 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC068880.5-201ENST00000624331 290 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC006386.2-201ENST00000624491 75 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AC012005.1-201ENST00000624575 75 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 AL603839.4-201ENST00000624658 1005 ntBASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.5□□□□□ -1.85
SMC4Q9NTJ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 MAPK10-266ENST00000641066 6555 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 HSPE1P11-201ENST00000339579 310 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 RNY3P10-201ENST00000384764 102 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 RN7SKP142-201ENST00000411236 328 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 ISCA1P1-201ENST00000426679 387 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AC105272.1-201ENST00000438604 198 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms